Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ephb3P54754 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ephb3P54754 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ephb3P54754 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Ephb3P54754 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.24□□□□□ -0.29
Ephb3P54754 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ephb3P54754 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Ephb3P54754 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Mir7221-201ENSMUST00000184009 72 ntBASIC13.24□□□□□ -0.29
Ephb3P54754 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.24□□□□□ -0.29
Ephb3P54754 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.24□□□□□ -0.29
Ephb3P54754 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ephb3P54754 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ephb3P54754 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.24□□□□□ -0.29
Ephb3P54754 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ephb3P54754 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Ephb3P54754 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.23□□□□□ -0.29
Ephb3P54754 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.23□□□□□ -0.29
Ephb3P54754 Gm23251-201ENSMUST00000103773 110 ntBASIC13.23□□□□□ -0.29
Ephb3P54754 Gm14644-201ENSMUST00000116671 647 ntBASIC13.23□□□□□ -0.29
Ephb3P54754 Gm13035-201ENSMUST00000117496 342 ntBASIC13.23□□□□□ -0.29
Ephb3P54754 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.23□□□□□ -0.29
Ephb3P54754 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.23□□□□□ -0.29
Ephb3P54754 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.23□□□□□ -0.29
Ephb3P54754 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.23□□□□□ -0.29
Ephb3P54754 Gm28071-201ENSMUST00000190355 478 ntBASIC13.23□□□□□ -0.29
Ephb3P54754 Gm8365-201ENSMUST00000197334 648 ntBASIC13.23□□□□□ -0.29
Ephb3P54754 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Ephb3P54754 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC13.23□□□□□ -0.29
Ephb3P54754 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.23□□□□□ -0.29
Ephb3P54754 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ephb3P54754 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ephb3P54754 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ephb3P54754 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.23□□□□□ -0.29
Ephb3P54754 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.23□□□□□ -0.29
Ephb3P54754 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ephb3P54754 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ephb3P54754 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ephb3P54754 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ephb3P54754 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ephb3P54754 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Ephb3P54754 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ephb3P54754 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Ephb3P54754 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ephb3P54754 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.22□□□□□ -0.29
Ephb3P54754 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.22□□□□□ -0.29
Ephb3P54754 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ephb3P54754 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Ephb3P54754 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.22□□□□□ -0.29
Ephb3P54754 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms