Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.96□□□□□ -0.01
RORAP35398 AC106886.1-201ENST00000568660 600 ntBASIC14.96□□□□□ -0.01
RORAP35398 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
RORAP35398 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.96□□□□□ -0.01
RORAP35398 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
RORAP35398 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.96□□□□□ -0.01
RORAP35398 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RORAP35398 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.96□□□□□ -0.01
RORAP35398 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RORAP35398 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.96□□□□□ -0.01
RORAP35398 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RORAP35398 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RORAP35398 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
RORAP35398 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RORAP35398 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.96□□□□□ -0.01
RORAP35398 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RORAP35398 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RORAP35398 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.96□□□□□ -0.02
RORAP35398 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RORAP35398 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 TSPY26P-202ENST00000565928 3884 ntBASIC14.95□□□□□ -0.02
RORAP35398 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.95□□□□□ -0.02
RORAP35398 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RORAP35398 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.95□□□□□ -0.02
RORAP35398 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.95□□□□□ -0.02
RORAP35398 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.95□□□□□ -0.02
RORAP35398 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.95□□□□□ -0.02
RORAP35398 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RORAP35398 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.95□□□□□ -0.02
RORAP35398 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 AC079776.1-201ENST00000401540 1152 ntBASIC14.95□□□□□ -0.02
RORAP35398 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.95□□□□□ -0.02
RORAP35398 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.95□□□□□ -0.02
RORAP35398 TTTY23B-201ENST00000442790 549 ntBASIC14.95□□□□□ -0.02
RORAP35398 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.95□□□□□ -0.02
RORAP35398 SLED1-202ENST00000512051 380 ntBASIC14.95□□□□□ -0.02
RORAP35398 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
RORAP35398 AL359881.2-201ENST00000602973 570 ntBASIC14.95□□□□□ -0.02
RORAP35398 AC097359.3-201ENST00000603982 1210 ntBASIC14.95□□□□□ -0.02
RORAP35398 AL008721.1-201ENST00000609964 604 ntBASIC14.95□□□□□ -0.02
RORAP35398 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.95□□□□□ -0.02
RORAP35398 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
RORAP35398 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RORAP35398 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RORAP35398 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
RORAP35398 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RORAP35398 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.95□□□□□ -0.02
RORAP35398 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.95□□□□□ -0.02
RORAP35398 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RORAP35398 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RORAP35398 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.94□□□□□ -0.02
RORAP35398 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 AC026691.1-201ENST00000602502 2017 ntBASIC14.94□□□□□ -0.02
RORAP35398 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.94□□□□□ -0.02
RORAP35398 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RORAP35398 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RORAP35398 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.94□□□□□ -0.02
RORAP35398 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.94□□□□□ -0.02
RORAP35398 AL442647.2-201ENST00000429864 857 ntBASIC14.94□□□□□ -0.02
RORAP35398 ATP5G2P4-201ENST00000442175 420 ntBASIC14.94□□□□□ -0.02
RORAP35398 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms