Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.17□□□□□ -0.14
Col2a1P28481 Gm19353-201ENSMUST00000184561 445 ntBASIC14.17□□□□□ -0.14
Col2a1P28481 Gm3332-201ENSMUST00000189337 928 ntBASIC14.17□□□□□ -0.14
Col2a1P28481 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.17□□□□□ -0.14
Col2a1P28481 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.17□□□□□ -0.14
Col2a1P28481 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Gm26448-201ENSMUST00000082446 203 ntBASIC14.17□□□□□ -0.14
Col2a1P28481 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.17□□□□□ -0.14
Col2a1P28481 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col2a1P28481 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.17□□□□□ -0.14
Col2a1P28481 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col2a1P28481 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.16□□□□□ -0.14
Col2a1P28481 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col2a1P28481 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col2a1P28481 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Col2a1P28481 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Gm23251-201ENSMUST00000103773 110 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Gm8566-201ENSMUST00000120174 465 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Gm25881-201ENSMUST00000157783 103 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Gm23085-201ENSMUST00000157849 293 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Gm22902-201ENSMUST00000158488 302 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.16□□□□□ -0.14
Col2a1P28481 Gm20426-201ENSMUST00000173657 440 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Gm44100-201ENSMUST00000204329 436 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.16□□□□□ -0.14
Col2a1P28481 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.16□□□□□ -0.14
Col2a1P28481 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Col2a1P28481 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.16□□□□□ -0.14
Col2a1P28481 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.16□□□□□ -0.14
Col2a1P28481 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.16□□□□□ -0.14
Col2a1P28481 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Col2a1P28481 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Col2a1P28481 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col2a1P28481 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col2a1P28481 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Col2a1P28481 Gm14263-201ENSMUST00000117955 746 ntBASIC14.15□□□□□ -0.14
Col2a1P28481 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.15□□□□□ -0.14
Col2a1P28481 Gm12176-201ENSMUST00000121420 875 ntBASIC14.15□□□□□ -0.14
Col2a1P28481 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Col2a1P28481 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col2a1P28481 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Col2a1P28481 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Col2a1P28481 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.15□□□□□ -0.14
Col2a1P28481 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.15□□□□□ -0.14
Col2a1P28481 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.15□□□□□ -0.14
Col2a1P28481 Gm807-202ENSMUST00000224929 408 ntBASIC14.15□□□□□ -0.14
Col2a1P28481 Gm5705-201ENSMUST00000066241 711 ntBASIC14.15□□□□□ -0.14
Col2a1P28481 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col2a1P28481 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Col2a1P28481 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Col2a1P28481 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.15□□□□□ -0.14
Col2a1P28481 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms