Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ttc3O88196 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.17□□□□□ -0.3
Ttc3O88196 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.17□□□□□ -0.3
Ttc3O88196 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ttc3O88196 Gm14760-201ENSMUST00000121831 999 ntBASIC13.17□□□□□ -0.3
Ttc3O88196 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.17□□□□□ -0.3
Ttc3O88196 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.17□□□□□ -0.3
Ttc3O88196 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Gm18304-201ENSMUST00000189162 546 ntBASIC13.17□□□□□ -0.3
Ttc3O88196 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ttc3O88196 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.17□□□□□ -0.3
Ttc3O88196 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Ttc3O88196 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ttc3O88196 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ttc3O88196 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.16□□□□□ -0.3
Ttc3O88196 Gm5616-201ENSMUST00000165252 384 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 Gm17040-202ENSMUST00000170597 889 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 Gm8741-201ENSMUST00000174736 384 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Ttc3O88196 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Gm17812-201ENSMUST00000204935 318 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 Gm5455-201ENSMUST00000058710 715 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Ttc3O88196 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 Gm22334-201ENSMUST00000158070 133 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.16□□□□□ -0.3
Ttc3O88196 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 Gm37986-201ENSMUST00000193285 383 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Gm18041-201ENSMUST00000218210 618 ntBASIC13.16□□□□□ -0.3
Ttc3O88196 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ttc3O88196 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ttc3O88196 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ttc3O88196 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.15□□□□□ -0.3
Ttc3O88196 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.15□□□□□ -0.3
Ttc3O88196 Gm10051-201ENSMUST00000145209 414 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm29615-201ENSMUST00000185371 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm28224-201ENSMUST00000186078 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm29001-201ENSMUST00000186177 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm28292-201ENSMUST00000186593 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm28101-201ENSMUST00000187608 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm29076-201ENSMUST00000187689 697 ntBASIC13.15□□□□□ -0.3
Ttc3O88196 Gm28302-201ENSMUST00000187931 697 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms