Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Gm14921-201ENSMUST00000118643 908 ntBASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Gm44397-201ENSMUST00000195950 113 ntBASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Gm6983-201ENSMUST00000214912 628 ntBASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Lysmd4Q8CC84 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Gm15321-201ENSMUST00000121290 288 ntBASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Gm7730-201ENSMUST00000212486 454 ntBASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Gm19220-201ENSMUST00000222682 803 ntBASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Gm5867-201ENSMUST00000063197 592 ntBASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Syt7-204ENSMUST00000223586 1344 ntBASIC11.35□□□□□ -0.59
Lysmd4Q8CC84 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Lysmd4Q8CC84 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms