Protein–RNA interactions for Protein: Q80U56

Avl9, Late secretory pathway protein AVL9 homolog, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Avl9Q80U56 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.3□□□□□ -0.44
Avl9Q80U56 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.3□□□□□ -0.44
Avl9Q80U56 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Avl9Q80U56 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Avl9Q80U56 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Avl9Q80U56 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Avl9Q80U56 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Avl9Q80U56 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.29□□□□□ -0.44
Avl9Q80U56 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Avl9Q80U56 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.29□□□□□ -0.44
Avl9Q80U56 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Gm12058-201ENSMUST00000118614 437 ntBASIC12.29□□□□□ -0.44
Avl9Q80U56 Gm14726-201ENSMUST00000120623 896 ntBASIC12.29□□□□□ -0.44
Avl9Q80U56 Gm25668-201ENSMUST00000157700 129 ntBASIC12.29□□□□□ -0.44
Avl9Q80U56 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Avl9Q80U56 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.29□□□□□ -0.44
Avl9Q80U56 Gm27023-201ENSMUST00000182372 285 ntBASIC12.29□□□□□ -0.44
Avl9Q80U56 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.29□□□□□ -0.44
Avl9Q80U56 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.29□□□□□ -0.44
Avl9Q80U56 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.29□□□□□ -0.44
Avl9Q80U56 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.29□□□□□ -0.44
Avl9Q80U56 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Avl9Q80U56 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.29□□□□□ -0.44
Avl9Q80U56 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.29□□□□□ -0.44
Avl9Q80U56 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Avl9Q80U56 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Avl9Q80U56 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.28□□□□□ -0.44
Avl9Q80U56 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.28□□□□□ -0.44
Avl9Q80U56 Gm24255-201ENSMUST00000104481 128 ntBASIC12.28□□□□□ -0.44
Avl9Q80U56 Gm13875-201ENSMUST00000120162 282 ntBASIC12.28□□□□□ -0.44
Avl9Q80U56 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Avl9Q80U56 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Avl9Q80U56 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.28□□□□□ -0.44
Avl9Q80U56 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.28□□□□□ -0.44
Avl9Q80U56 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Avl9Q80U56 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.28□□□□□ -0.44
Avl9Q80U56 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.28□□□□□ -0.44
Avl9Q80U56 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Avl9Q80U56 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Avl9Q80U56 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Avl9Q80U56 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.27□□□□□ -0.44
Avl9Q80U56 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Avl9Q80U56 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Avl9Q80U56 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Avl9Q80U56 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Avl9Q80U56 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms