Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.53□□□□□ -0.24
ShbQ6PD21 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.53□□□□□ -0.24
ShbQ6PD21 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.53□□□□□ -0.24
ShbQ6PD21 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ShbQ6PD21 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ShbQ6PD21 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.53□□□□□ -0.24
ShbQ6PD21 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.53□□□□□ -0.24
ShbQ6PD21 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
ShbQ6PD21 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ShbQ6PD21 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ShbQ6PD21 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ShbQ6PD21 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ShbQ6PD21 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ShbQ6PD21 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ShbQ6PD21 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ShbQ6PD21 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ShbQ6PD21 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ShbQ6PD21 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
ShbQ6PD21 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.52□□□□□ -0.25
ShbQ6PD21 Gm12579-201ENSMUST00000118040 783 ntBASIC13.52□□□□□ -0.25
ShbQ6PD21 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.52□□□□□ -0.25
ShbQ6PD21 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.52□□□□□ -0.25
ShbQ6PD21 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.52□□□□□ -0.25
ShbQ6PD21 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Gm29410-201ENSMUST00000188383 694 ntBASIC13.52□□□□□ -0.25
ShbQ6PD21 Mt1-202ENSMUST00000211807 1085 ntBASIC13.52□□□□□ -0.25
ShbQ6PD21 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.52□□□□□ -0.25
ShbQ6PD21 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
ShbQ6PD21 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
ShbQ6PD21 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
ShbQ6PD21 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
ShbQ6PD21 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ShbQ6PD21 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.52□□□□□ -0.25
ShbQ6PD21 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.51□□□□□ -0.25
ShbQ6PD21 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Gm13022-201ENSMUST00000121181 285 ntBASIC13.51□□□□□ -0.25
ShbQ6PD21 Gm11354-201ENSMUST00000121974 422 ntBASIC13.51□□□□□ -0.25
ShbQ6PD21 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.51□□□□□ -0.25
ShbQ6PD21 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Gm18059-201ENSMUST00000208073 580 ntBASIC13.51□□□□□ -0.25
ShbQ6PD21 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.51□□□□□ -0.25
ShbQ6PD21 Gm5705-201ENSMUST00000066241 711 ntBASIC13.51□□□□□ -0.25
ShbQ6PD21 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.51□□□□□ -0.25
ShbQ6PD21 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ShbQ6PD21 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.5□□□□□ -0.25
ShbQ6PD21 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShbQ6PD21 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms