Protein–RNA interactions for Protein: P07350

Ifna6, Interferon alpha-6, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna6P07350 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.4□□□□□ -0.74
Ifna6P07350 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Ifna6P07350 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.4□□□□□ -0.74
Ifna6P07350 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.4□□□□□ -0.74
Ifna6P07350 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.4□□□□□ -0.74
Ifna6P07350 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.4□□□□□ -0.74
Ifna6P07350 Gm10576-201ENSMUST00000191927 825 ntBASIC10.4□□□□□ -0.74
Ifna6P07350 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.4□□□□□ -0.74
Ifna6P07350 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.4□□□□□ -0.74
Ifna6P07350 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.4□□□□□ -0.74
Ifna6P07350 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Gm20445-201ENSMUST00000061905 565 ntBASIC10.4□□□□□ -0.74
Ifna6P07350 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ifna6P07350 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ifna6P07350 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Ifna6P07350 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
Ifna6P07350 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ifna6P07350 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ifna6P07350 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.75
Ifna6P07350 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Ifna6P07350 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ifna6P07350 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ifna6P07350 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Ifna6P07350 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.39□□□□□ -0.75
Ifna6P07350 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.39□□□□□ -0.75
Ifna6P07350 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Gm26308-201ENSMUST00000157768 69 ntBASIC10.39□□□□□ -0.75
Ifna6P07350 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.39□□□□□ -0.75
Ifna6P07350 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Gm27702-201ENSMUST00000184512 56 ntBASIC10.39□□□□□ -0.75
Ifna6P07350 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Gm38294-201ENSMUST00000192831 381 ntBASIC10.39□□□□□ -0.75
Ifna6P07350 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.39□□□□□ -0.75
Ifna6P07350 Gm44069-201ENSMUST00000204898 506 ntBASIC10.39□□□□□ -0.75
Ifna6P07350 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Ifna6P07350 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ifna6P07350 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Ifna6P07350 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.39□□□□□ -0.75
Ifna6P07350 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ifna6P07350 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ifna6P07350 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.39□□□□□ -0.75
Ifna6P07350 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ifna6P07350 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ifna6P07350 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ifna6P07350 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ifna6P07350 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ifna6P07350 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ifna6P07350 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.38□□□□□ -0.75
Ifna6P07350 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms