Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxa4P06798 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm9630-201ENSMUST00000178304 885 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm27023-201ENSMUST00000182372 285 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm27516-201ENSMUST00000184237 98 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm37201-201ENSMUST00000191845 523 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm6621-201ENSMUST00000193251 772 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm10076-201ENSMUST00000073238 384 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm24136-201ENSMUST00000083374 165 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.48□□□□□ -0.41
Hoxa4P06798 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Hoxa4P06798 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxa4P06798 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Gm14726-201ENSMUST00000120623 896 ntBASIC12.47□□□□□ -0.41
Hoxa4P06798 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.47□□□□□ -0.41
Hoxa4P06798 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Gm45865-201ENSMUST00000211815 945 ntBASIC12.47□□□□□ -0.41
Hoxa4P06798 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.47□□□□□ -0.41
Hoxa4P06798 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.47□□□□□ -0.41
Hoxa4P06798 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxa4P06798 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxa4P06798 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.46□□□□□ -0.41
Hoxa4P06798 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Hoxa4P06798 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxa4P06798 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hoxa4P06798 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hoxa4P06798 Gm11531-201ENSMUST00000117614 555 ntBASIC12.46□□□□□ -0.41
Hoxa4P06798 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxa4P06798 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Hoxa4P06798 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.46□□□□□ -0.41
Hoxa4P06798 Gm27243-201ENSMUST00000183964 521 ntBASIC12.46□□□□□ -0.41
Hoxa4P06798 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms