Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 AC004987.2-201ENST00000395959 1148 ntBASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 HIST3H2BA-201ENST00000436555 524 ntBASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 AC123567.1-201ENST00000548294 1261 ntBASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 AL008721.1-201ENST00000609964 604 ntBASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 CDC14C-201ENST00000428251 1719 ntBASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 AL603832.2-201ENST00000566195 2125 ntBASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA3F8WFD2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 GIMAP3P-201ENST00000495150 836 ntBASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 AC069224.1-201ENST00000566372 1715 ntBASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA3F8WFD2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 AL512384.1-201ENST00000406683 331 ntBASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 MEIS3P1-201ENST00000495167 958 ntBASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 AC132938.2-201ENST00000579188 680 ntBASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPA3F8WFD2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms