Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClcnkaQ9WUB7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClcnkaQ9WUB7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClcnkaQ9WUB7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ClcnkaQ9WUB7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
ClcnkaQ9WUB7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ClcnkaQ9WUB7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.31■□□□□ 0.68
ClcnkaQ9WUB7 Gm45444-201ENSMUST00000211394 898 ntBASIC19.31■□□□□ 0.68
ClcnkaQ9WUB7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClcnkaQ9WUB7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClcnkaQ9WUB7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClcnkaQ9WUB7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClcnkaQ9WUB7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClcnkaQ9WUB7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClcnkaQ9WUB7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClcnkaQ9WUB7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClcnkaQ9WUB7 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.28■□□□□ 0.68
ClcnkaQ9WUB7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ClcnkaQ9WUB7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClcnkaQ9WUB7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClcnkaQ9WUB7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClcnkaQ9WUB7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClcnkaQ9WUB7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
ClcnkaQ9WUB7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClcnkaQ9WUB7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ClcnkaQ9WUB7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClcnkaQ9WUB7 Notumos-201ENSMUST00000151998 2659 ntBASIC19.27■□□□□ 0.67
ClcnkaQ9WUB7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ClcnkaQ9WUB7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ClcnkaQ9WUB7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ClcnkaQ9WUB7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClcnkaQ9WUB7 Gm13238-201ENSMUST00000117655 780 ntBASIC19.26■□□□□ 0.67
ClcnkaQ9WUB7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.26■□□□□ 0.67
ClcnkaQ9WUB7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ClcnkaQ9WUB7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClcnkaQ9WUB7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.24■□□□□ 0.67
ClcnkaQ9WUB7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ClcnkaQ9WUB7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ClcnkaQ9WUB7 Gm43566-201ENSMUST00000196851 808 ntBASIC19.23■□□□□ 0.67
ClcnkaQ9WUB7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClcnkaQ9WUB7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ClcnkaQ9WUB7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClcnkaQ9WUB7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ClcnkaQ9WUB7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClcnkaQ9WUB7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ClcnkaQ9WUB7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClcnkaQ9WUB7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.22■□□□□ 0.67
ClcnkaQ9WUB7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ClcnkaQ9WUB7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ClcnkaQ9WUB7 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.21■□□□□ 0.67
ClcnkaQ9WUB7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ClcnkaQ9WUB7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.2■□□□□ 0.66
ClcnkaQ9WUB7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClcnkaQ9WUB7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ClcnkaQ9WUB7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.2■□□□□ 0.66
ClcnkaQ9WUB7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms