Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nubp2Q9R061 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.54■□□□□ 0.56
Nubp2Q9R061 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nubp2Q9R061 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nubp2Q9R061 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nubp2Q9R061 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nubp2Q9R061 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nubp2Q9R061 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nubp2Q9R061 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
Nubp2Q9R061 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nubp2Q9R061 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nubp2Q9R061 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nubp2Q9R061 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Nubp2Q9R061 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nubp2Q9R061 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Nubp2Q9R061 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nubp2Q9R061 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.52■□□□□ 0.56
Nubp2Q9R061 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nubp2Q9R061 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nubp2Q9R061 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nubp2Q9R061 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nubp2Q9R061 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nubp2Q9R061 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.55
Nubp2Q9R061 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nubp2Q9R061 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nubp2Q9R061 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nubp2Q9R061 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.51■□□□□ 0.55
Nubp2Q9R061 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nubp2Q9R061 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nubp2Q9R061 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.51■□□□□ 0.55
Nubp2Q9R061 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nubp2Q9R061 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nubp2Q9R061 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nubp2Q9R061 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nubp2Q9R061 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nubp2Q9R061 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nubp2Q9R061 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.5■□□□□ 0.55
Nubp2Q9R061 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Nubp2Q9R061 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nubp2Q9R061 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nubp2Q9R061 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Nubp2Q9R061 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.48■□□□□ 0.55
Nubp2Q9R061 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nubp2Q9R061 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nubp2Q9R061 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nubp2Q9R061 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.48■□□□□ 0.55
Nubp2Q9R061 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nubp2Q9R061 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Nubp2Q9R061 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nubp2Q9R061 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nubp2Q9R061 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nubp2Q9R061 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nubp2Q9R061 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nubp2Q9R061 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nubp2Q9R061 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nubp2Q9R061 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nubp2Q9R061 Gm15820-201ENSMUST00000201566 728 ntBASIC18.47■□□□□ 0.55
Nubp2Q9R061 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.47■□□□□ 0.55
Nubp2Q9R061 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nubp2Q9R061 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nubp2Q9R061 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nubp2Q9R061 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nubp2Q9R061 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nubp2Q9R061 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.46■□□□□ 0.55
Nubp2Q9R061 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nubp2Q9R061 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.46■□□□□ 0.55
Nubp2Q9R061 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.46■□□□□ 0.55
Nubp2Q9R061 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nubp2Q9R061 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nubp2Q9R061 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.45■□□□□ 0.54
Nubp2Q9R061 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nubp2Q9R061 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nubp2Q9R061 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Nubp2Q9R061 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nubp2Q9R061 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nubp2Q9R061 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Nubp2Q9R061 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nubp2Q9R061 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nubp2Q9R061 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms