Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Echdc3Q9D7J9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Echdc3Q9D7J9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Echdc3Q9D7J9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Echdc3Q9D7J9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Echdc3Q9D7J9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Echdc3Q9D7J9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Echdc3Q9D7J9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Echdc3Q9D7J9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.35■□□□□ 0.85
Echdc3Q9D7J9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Echdc3Q9D7J9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Echdc3Q9D7J9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Echdc3Q9D7J9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Echdc3Q9D7J9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Echdc3Q9D7J9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Echdc3Q9D7J9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Echdc3Q9D7J9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Echdc3Q9D7J9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Echdc3Q9D7J9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Echdc3Q9D7J9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Echdc3Q9D7J9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Echdc3Q9D7J9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Echdc3Q9D7J9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Echdc3Q9D7J9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Echdc3Q9D7J9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Echdc3Q9D7J9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Echdc3Q9D7J9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Echdc3Q9D7J9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Echdc3Q9D7J9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Echdc3Q9D7J9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Echdc3Q9D7J9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Echdc3Q9D7J9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Echdc3Q9D7J9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Echdc3Q9D7J9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Echdc3Q9D7J9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Echdc3Q9D7J9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.29■□□□□ 0.84
Echdc3Q9D7J9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Echdc3Q9D7J9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Echdc3Q9D7J9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Echdc3Q9D7J9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Echdc3Q9D7J9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Echdc3Q9D7J9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.28■□□□□ 0.84
Echdc3Q9D7J9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Echdc3Q9D7J9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Echdc3Q9D7J9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Echdc3Q9D7J9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Echdc3Q9D7J9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Echdc3Q9D7J9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Echdc3Q9D7J9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Echdc3Q9D7J9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Echdc3Q9D7J9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Echdc3Q9D7J9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Echdc3Q9D7J9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Echdc3Q9D7J9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Echdc3Q9D7J9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.27■□□□□ 0.84
Echdc3Q9D7J9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Echdc3Q9D7J9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Echdc3Q9D7J9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Echdc3Q9D7J9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Echdc3Q9D7J9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Echdc3Q9D7J9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Echdc3Q9D7J9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Echdc3Q9D7J9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Echdc3Q9D7J9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Echdc3Q9D7J9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Echdc3Q9D7J9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Echdc3Q9D7J9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Echdc3Q9D7J9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Echdc3Q9D7J9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Echdc3Q9D7J9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.24■□□□□ 0.83
Echdc3Q9D7J9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Echdc3Q9D7J9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Echdc3Q9D7J9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Echdc3Q9D7J9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
Echdc3Q9D7J9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Echdc3Q9D7J9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Echdc3Q9D7J9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Echdc3Q9D7J9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms