Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1eQ9CZQ6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Raet1eQ9CZQ6 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.51■□□□□ 0.55
Raet1eQ9CZQ6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
Raet1eQ9CZQ6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1eQ9CZQ6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Raet1eQ9CZQ6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Raet1eQ9CZQ6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Raet1eQ9CZQ6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1eQ9CZQ6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1eQ9CZQ6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1eQ9CZQ6 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.5■□□□□ 0.55
Raet1eQ9CZQ6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Raet1eQ9CZQ6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Raet1eQ9CZQ6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1eQ9CZQ6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Raet1eQ9CZQ6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Raet1eQ9CZQ6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1eQ9CZQ6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Raet1eQ9CZQ6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1eQ9CZQ6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1eQ9CZQ6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Raet1eQ9CZQ6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Raet1eQ9CZQ6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Raet1eQ9CZQ6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1eQ9CZQ6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1eQ9CZQ6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1eQ9CZQ6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Raet1eQ9CZQ6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Raet1eQ9CZQ6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.46■□□□□ 0.55
Raet1eQ9CZQ6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.46■□□□□ 0.55
Raet1eQ9CZQ6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1eQ9CZQ6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1eQ9CZQ6 Gm45364-201ENSMUST00000210883 159 ntBASIC18.46■□□□□ 0.55
Raet1eQ9CZQ6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Raet1eQ9CZQ6 Iqck-206ENSMUST00000208658 2891 ntBASIC18.46■□□□□ 0.55
Raet1eQ9CZQ6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1eQ9CZQ6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1eQ9CZQ6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1eQ9CZQ6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1eQ9CZQ6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1eQ9CZQ6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1eQ9CZQ6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Raet1eQ9CZQ6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Raet1eQ9CZQ6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1eQ9CZQ6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.42■□□□□ 0.54
Raet1eQ9CZQ6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Raet1eQ9CZQ6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Raet1eQ9CZQ6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Raet1eQ9CZQ6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.41■□□□□ 0.54
Raet1eQ9CZQ6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Raet1eQ9CZQ6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.41■□□□□ 0.54
Raet1eQ9CZQ6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms