Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.02■□□□□ 0.8
Shmt2Q9CZN7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Shmt2Q9CZN7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Shmt2Q9CZN7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shmt2Q9CZN7 Gm5921-201ENSMUST00000075898 882 ntBASIC20.01■□□□□ 0.79
Shmt2Q9CZN7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shmt2Q9CZN7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.01■□□□□ 0.79
Shmt2Q9CZN7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shmt2Q9CZN7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Shmt2Q9CZN7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.01■□□□□ 0.79
Shmt2Q9CZN7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.01■□□□□ 0.79
Shmt2Q9CZN7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Shmt2Q9CZN7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20■□□□□ 0.79
Shmt2Q9CZN7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Shmt2Q9CZN7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shmt2Q9CZN7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Shmt2Q9CZN7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20■□□□□ 0.79
Shmt2Q9CZN7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Shmt2Q9CZN7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shmt2Q9CZN7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20■□□□□ 0.79
Shmt2Q9CZN7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20■□□□□ 0.79
Shmt2Q9CZN7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20■□□□□ 0.79
Shmt2Q9CZN7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Shmt2Q9CZN7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shmt2Q9CZN7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Shmt2Q9CZN7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Shmt2Q9CZN7 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.99■□□□□ 0.79
Shmt2Q9CZN7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Shmt2Q9CZN7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Shmt2Q9CZN7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shmt2Q9CZN7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shmt2Q9CZN7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Shmt2Q9CZN7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shmt2Q9CZN7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shmt2Q9CZN7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shmt2Q9CZN7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shmt2Q9CZN7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shmt2Q9CZN7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shmt2Q9CZN7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Shmt2Q9CZN7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
Shmt2Q9CZN7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Shmt2Q9CZN7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Shmt2Q9CZN7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Shmt2Q9CZN7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Shmt2Q9CZN7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.94■□□□□ 0.78
Shmt2Q9CZN7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.94■□□□□ 0.78
Shmt2Q9CZN7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt2Q9CZN7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt2Q9CZN7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt2Q9CZN7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt2Q9CZN7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt2Q9CZN7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.93■□□□□ 0.78
Shmt2Q9CZN7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt2Q9CZN7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt2Q9CZN7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Shmt2Q9CZN7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt2Q9CZN7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt2Q9CZN7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt2Q9CZN7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Shmt2Q9CZN7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt2Q9CZN7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt2Q9CZN7 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.92■□□□□ 0.78
Shmt2Q9CZN7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt2Q9CZN7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt2Q9CZN7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt2Q9CZN7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt2Q9CZN7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms