Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Chd1lQ9CXF7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Chd1lQ9CXF7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Chd1lQ9CXF7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd1lQ9CXF7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Chd1lQ9CXF7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd1lQ9CXF7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Chd1lQ9CXF7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1lQ9CXF7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1lQ9CXF7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Chd1lQ9CXF7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1lQ9CXF7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1lQ9CXF7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1lQ9CXF7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1lQ9CXF7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Chd1lQ9CXF7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1lQ9CXF7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1lQ9CXF7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1lQ9CXF7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1lQ9CXF7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1lQ9CXF7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1lQ9CXF7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Chd1lQ9CXF7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chd1lQ9CXF7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Chd1lQ9CXF7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chd1lQ9CXF7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Chd1lQ9CXF7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chd1lQ9CXF7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chd1lQ9CXF7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Chd1lQ9CXF7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Chd1lQ9CXF7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.72■■□□□ 1.39
Chd1lQ9CXF7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Chd1lQ9CXF7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Chd1lQ9CXF7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd1lQ9CXF7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Chd1lQ9CXF7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd1lQ9CXF7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Chd1lQ9CXF7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd1lQ9CXF7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Chd1lQ9CXF7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd1lQ9CXF7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd1lQ9CXF7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd1lQ9CXF7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Chd1lQ9CXF7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd1lQ9CXF7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd1lQ9CXF7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Chd1lQ9CXF7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Chd1lQ9CXF7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Chd1lQ9CXF7 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.7■■□□□ 1.38
Chd1lQ9CXF7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Chd1lQ9CXF7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chd1lQ9CXF7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Chd1lQ9CXF7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chd1lQ9CXF7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Chd1lQ9CXF7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Chd1lQ9CXF7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Chd1lQ9CXF7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Chd1lQ9CXF7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chd1lQ9CXF7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Chd1lQ9CXF7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Chd1lQ9CXF7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.69■■□□□ 1.38
Chd1lQ9CXF7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Chd1lQ9CXF7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chd1lQ9CXF7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Chd1lQ9CXF7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Chd1lQ9CXF7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
Chd1lQ9CXF7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
Chd1lQ9CXF7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Chd1lQ9CXF7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Chd1lQ9CXF7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Chd1lQ9CXF7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Chd1lQ9CXF7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Chd1lQ9CXF7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.67■■□□□ 1.38
Chd1lQ9CXF7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Chd1lQ9CXF7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC23.66■■□□□ 1.38
Chd1lQ9CXF7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Chd1lQ9CXF7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Chd1lQ9CXF7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
Chd1lQ9CXF7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Chd1lQ9CXF7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Chd1lQ9CXF7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Chd1lQ9CXF7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Chd1lQ9CXF7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Chd1lQ9CXF7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Chd1lQ9CXF7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Chd1lQ9CXF7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC23.65■■□□□ 1.38
Chd1lQ9CXF7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Chd1lQ9CXF7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Chd1lQ9CXF7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Chd1lQ9CXF7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms