Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Lrrc40Q9CRC8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrrc40Q9CRC8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lrrc40Q9CRC8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lrrc40Q9CRC8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrrc40Q9CRC8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrrc40Q9CRC8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.91■□□□□ 0.94
Lrrc40Q9CRC8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.91■□□□□ 0.94
Lrrc40Q9CRC8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrrc40Q9CRC8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lrrc40Q9CRC8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Lrrc40Q9CRC8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lrrc40Q9CRC8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lrrc40Q9CRC8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Lrrc40Q9CRC8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Lrrc40Q9CRC8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lrrc40Q9CRC8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Lrrc40Q9CRC8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lrrc40Q9CRC8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 Cap2-205ENSMUST00000225824 1634 ntBASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Lrrc40Q9CRC8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Lrrc40Q9CRC8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrrc40Q9CRC8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Lrrc40Q9CRC8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lrrc40Q9CRC8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Lrrc40Q9CRC8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lrrc40Q9CRC8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Lrrc40Q9CRC8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lrrc40Q9CRC8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.86■□□□□ 0.93
Lrrc40Q9CRC8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lrrc40Q9CRC8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.86■□□□□ 0.93
Lrrc40Q9CRC8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Lrrc40Q9CRC8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc40Q9CRC8 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.84■□□□□ 0.93
Lrrc40Q9CRC8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc40Q9CRC8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.84■□□□□ 0.93
Lrrc40Q9CRC8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc40Q9CRC8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.84■□□□□ 0.93
Lrrc40Q9CRC8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc40Q9CRC8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lrrc40Q9CRC8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lrrc40Q9CRC8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lrrc40Q9CRC8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
Lrrc40Q9CRC8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lrrc40Q9CRC8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lrrc40Q9CRC8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Lrrc40Q9CRC8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lrrc40Q9CRC8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lrrc40Q9CRC8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Lrrc40Q9CRC8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrrc40Q9CRC8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lrrc40Q9CRC8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Lrrc40Q9CRC8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.82■□□□□ 0.92
Lrrc40Q9CRC8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lrrc40Q9CRC8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Lrrc40Q9CRC8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.81■□□□□ 0.92
Lrrc40Q9CRC8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.81■□□□□ 0.92
Lrrc40Q9CRC8 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.81■□□□□ 0.92
Lrrc40Q9CRC8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrc40Q9CRC8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Lrrc40Q9CRC8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrc40Q9CRC8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Lrrc40Q9CRC8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrc40Q9CRC8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrc40Q9CRC8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lrrc40Q9CRC8 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms