Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdhb1Q91Y08 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Pcdhb1Q91Y08 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb1Q91Y08 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb1Q91Y08 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.95■■□□□ 1.1
Pcdhb1Q91Y08 Gm5921-201ENSMUST00000075898 882 ntBASIC21.95■■□□□ 1.1
Pcdhb1Q91Y08 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb1Q91Y08 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb1Q91Y08 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdhb1Q91Y08 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Pcdhb1Q91Y08 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdhb1Q91Y08 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb1Q91Y08 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb1Q91Y08 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb1Q91Y08 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdhb1Q91Y08 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Pcdhb1Q91Y08 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb1Q91Y08 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb1Q91Y08 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Pcdhb1Q91Y08 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
Pcdhb1Q91Y08 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.92■■□□□ 1.1
Pcdhb1Q91Y08 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdhb1Q91Y08 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb1Q91Y08 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb1Q91Y08 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb1Q91Y08 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb1Q91Y08 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.91■■□□□ 1.1
Pcdhb1Q91Y08 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.91■■□□□ 1.1
Pcdhb1Q91Y08 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb1Q91Y08 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdhb1Q91Y08 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Pcdhb1Q91Y08 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Pcdhb1Q91Y08 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb1Q91Y08 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb1Q91Y08 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdhb1Q91Y08 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.9■■□□□ 1.1
Pcdhb1Q91Y08 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Pcdhb1Q91Y08 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb1Q91Y08 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb1Q91Y08 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb1Q91Y08 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb1Q91Y08 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdhb1Q91Y08 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.88■■□□□ 1.09
Pcdhb1Q91Y08 Gm13238-201ENSMUST00000117655 780 ntBASIC21.88■■□□□ 1.09
Pcdhb1Q91Y08 Gm43566-201ENSMUST00000196851 808 ntBASIC21.88■■□□□ 1.09
Pcdhb1Q91Y08 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb1Q91Y08 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.88■■□□□ 1.09
Pcdhb1Q91Y08 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdhb1Q91Y08 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdhb1Q91Y08 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb1Q91Y08 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdhb1Q91Y08 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.87■■□□□ 1.09
Pcdhb1Q91Y08 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pcdhb1Q91Y08 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdhb1Q91Y08 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb1Q91Y08 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdhb1Q91Y08 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdhb1Q91Y08 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdhb1Q91Y08 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb1Q91Y08 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb1Q91Y08 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb1Q91Y08 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb1Q91Y08 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb1Q91Y08 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdhb1Q91Y08 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Pcdhb1Q91Y08 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Pcdhb1Q91Y08 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.83■■□□□ 1.09
Pcdhb1Q91Y08 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb1Q91Y08 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.83■■□□□ 1.08
Pcdhb1Q91Y08 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb1Q91Y08 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb1Q91Y08 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb1Q91Y08 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb1Q91Y08 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb1Q91Y08 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb1Q91Y08 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.82■■□□□ 1.08
Pcdhb1Q91Y08 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms