Protein–RNA interactions for Protein: Q8VHT7

Gtf3a, Transcription factor IIIA, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3aQ8VHT7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Gtf3aQ8VHT7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3aQ8VHT7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3aQ8VHT7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3aQ8VHT7 Gm40881-201ENSMUST00000223397 166 ntBASIC18.15■□□□□ 0.5
Gtf3aQ8VHT7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3aQ8VHT7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3aQ8VHT7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gtf3aQ8VHT7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Gtf3aQ8VHT7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3aQ8VHT7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.14■□□□□ 0.49
Gtf3aQ8VHT7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3aQ8VHT7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.14■□□□□ 0.49
Gtf3aQ8VHT7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3aQ8VHT7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3aQ8VHT7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Gtf3aQ8VHT7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3aQ8VHT7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3aQ8VHT7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3aQ8VHT7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3aQ8VHT7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.13■□□□□ 0.49
Gtf3aQ8VHT7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3aQ8VHT7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.13■□□□□ 0.49
Gtf3aQ8VHT7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3aQ8VHT7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gtf3aQ8VHT7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gtf3aQ8VHT7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Gm10399-202ENSMUST00000202768 748 ntBASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gtf3aQ8VHT7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3aQ8VHT7 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.1■□□□□ 0.49
Gtf3aQ8VHT7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.1■□□□□ 0.49
Gtf3aQ8VHT7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3aQ8VHT7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3aQ8VHT7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.1■□□□□ 0.49
Gtf3aQ8VHT7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.1■□□□□ 0.49
Gtf3aQ8VHT7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gtf3aQ8VHT7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gtf3aQ8VHT7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Gtf3aQ8VHT7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gtf3aQ8VHT7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gtf3aQ8VHT7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gtf3aQ8VHT7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf3aQ8VHT7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.08■□□□□ 0.48
Gtf3aQ8VHT7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf3aQ8VHT7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gtf3aQ8VHT7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gtf3aQ8VHT7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gtf3aQ8VHT7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gtf3aQ8VHT7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gtf3aQ8VHT7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gtf3aQ8VHT7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gtf3aQ8VHT7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Gtf3aQ8VHT7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gtf3aQ8VHT7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.06■□□□□ 0.48
Gtf3aQ8VHT7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gtf3aQ8VHT7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.06■□□□□ 0.48
Gtf3aQ8VHT7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf3aQ8VHT7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf3aQ8VHT7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms