Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rab40bQ8VHP8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab40bQ8VHP8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.91■□□□□ 0.62
Rab40bQ8VHP8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.91■□□□□ 0.62
Rab40bQ8VHP8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab40bQ8VHP8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rab40bQ8VHP8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Rab40bQ8VHP8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab40bQ8VHP8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab40bQ8VHP8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.89■□□□□ 0.61
Rab40bQ8VHP8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab40bQ8VHP8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.89■□□□□ 0.61
Rab40bQ8VHP8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab40bQ8VHP8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.89■□□□□ 0.61
Rab40bQ8VHP8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab40bQ8VHP8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab40bQ8VHP8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab40bQ8VHP8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab40bQ8VHP8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab40bQ8VHP8 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.87■□□□□ 0.61
Rab40bQ8VHP8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab40bQ8VHP8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab40bQ8VHP8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab40bQ8VHP8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab40bQ8VHP8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab40bQ8VHP8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.86■□□□□ 0.61
Rab40bQ8VHP8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab40bQ8VHP8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.86■□□□□ 0.61
Rab40bQ8VHP8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rab40bQ8VHP8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab40bQ8VHP8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab40bQ8VHP8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab40bQ8VHP8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rab40bQ8VHP8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.85■□□□□ 0.61
Rab40bQ8VHP8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab40bQ8VHP8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Rab40bQ8VHP8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rab40bQ8VHP8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rab40bQ8VHP8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rab40bQ8VHP8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab40bQ8VHP8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rab40bQ8VHP8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab40bQ8VHP8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab40bQ8VHP8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rab40bQ8VHP8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rab40bQ8VHP8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab40bQ8VHP8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab40bQ8VHP8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.82■□□□□ 0.6
Rab40bQ8VHP8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab40bQ8VHP8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab40bQ8VHP8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.82■□□□□ 0.6
Rab40bQ8VHP8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rab40bQ8VHP8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rab40bQ8VHP8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rab40bQ8VHP8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab40bQ8VHP8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rab40bQ8VHP8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rab40bQ8VHP8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab40bQ8VHP8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab40bQ8VHP8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab40bQ8VHP8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rab40bQ8VHP8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40bQ8VHP8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40bQ8VHP8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40bQ8VHP8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40bQ8VHP8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40bQ8VHP8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rab40bQ8VHP8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms