Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx39aQ8VDW0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx39aQ8VDW0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx39aQ8VDW0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx39aQ8VDW0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx39aQ8VDW0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.44■■□□□ 1.34
Ddx39aQ8VDW0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx39aQ8VDW0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx39aQ8VDW0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx39aQ8VDW0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx39aQ8VDW0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.43■■□□□ 1.34
Ddx39aQ8VDW0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC23.43■■□□□ 1.34
Ddx39aQ8VDW0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.43■■□□□ 1.34
Ddx39aQ8VDW0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Ddx39aQ8VDW0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
Ddx39aQ8VDW0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx39aQ8VDW0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx39aQ8VDW0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx39aQ8VDW0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.41■■□□□ 1.34
Ddx39aQ8VDW0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.41■■□□□ 1.34
Ddx39aQ8VDW0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx39aQ8VDW0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx39aQ8VDW0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
Ddx39aQ8VDW0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx39aQ8VDW0 Gm12922-201ENSMUST00000120626 809 ntBASIC23.4■■□□□ 1.34
Ddx39aQ8VDW0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx39aQ8VDW0 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.4■■□□□ 1.34
Ddx39aQ8VDW0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx39aQ8VDW0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx39aQ8VDW0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ddx39aQ8VDW0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ddx39aQ8VDW0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Ddx39aQ8VDW0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Ddx39aQ8VDW0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.39■■□□□ 1.33
Ddx39aQ8VDW0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.39■■□□□ 1.33
Ddx39aQ8VDW0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.39■■□□□ 1.33
Ddx39aQ8VDW0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx39aQ8VDW0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.38■■□□□ 1.33
Ddx39aQ8VDW0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx39aQ8VDW0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.38■■□□□ 1.33
Ddx39aQ8VDW0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx39aQ8VDW0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx39aQ8VDW0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx39aQ8VDW0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx39aQ8VDW0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx39aQ8VDW0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC23.37■■□□□ 1.33
Ddx39aQ8VDW0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx39aQ8VDW0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Ddx39aQ8VDW0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Ddx39aQ8VDW0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx39aQ8VDW0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx39aQ8VDW0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Ddx39aQ8VDW0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx39aQ8VDW0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.35■■□□□ 1.33
Ddx39aQ8VDW0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx39aQ8VDW0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx39aQ8VDW0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Ddx39aQ8VDW0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx39aQ8VDW0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx39aQ8VDW0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ddx39aQ8VDW0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx39aQ8VDW0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.34■■□□□ 1.33
Ddx39aQ8VDW0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx39aQ8VDW0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ddx39aQ8VDW0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ddx39aQ8VDW0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Ddx39aQ8VDW0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.33■■□□□ 1.33
Ddx39aQ8VDW0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Ddx39aQ8VDW0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx39aQ8VDW0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.32■■□□□ 1.32
Ddx39aQ8VDW0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx39aQ8VDW0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx39aQ8VDW0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ddx39aQ8VDW0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx39aQ8VDW0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Ddx39aQ8VDW0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx39aQ8VDW0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ddx39aQ8VDW0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.31■■□□□ 1.32
Ddx39aQ8VDW0 Golgb1-201ENSMUST00000023534 498 ntBASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms