Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.82■□□□□ 0.92
Alms1Q8K4E0 Gm6139-201ENSMUST00000079261 882 ntBASIC20.82■□□□□ 0.92
Alms1Q8K4E0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Alms1Q8K4E0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.82■□□□□ 0.92
Alms1Q8K4E0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Alms1Q8K4E0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Alms1Q8K4E0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Alms1Q8K4E0 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.82■□□□□ 0.92
Alms1Q8K4E0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Alms1Q8K4E0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Alms1Q8K4E0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alms1Q8K4E0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alms1Q8K4E0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alms1Q8K4E0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alms1Q8K4E0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alms1Q8K4E0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alms1Q8K4E0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Alms1Q8K4E0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Alms1Q8K4E0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Alms1Q8K4E0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Alms1Q8K4E0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Alms1Q8K4E0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Alms1Q8K4E0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Alms1Q8K4E0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Alms1Q8K4E0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Alms1Q8K4E0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Alms1Q8K4E0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Alms1Q8K4E0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Alms1Q8K4E0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Alms1Q8K4E0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alms1Q8K4E0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Alms1Q8K4E0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Alms1Q8K4E0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Alms1Q8K4E0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Alms1Q8K4E0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Alms1Q8K4E0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Alms1Q8K4E0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Alms1Q8K4E0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Alms1Q8K4E0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.77■□□□□ 0.92
Alms1Q8K4E0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Alms1Q8K4E0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Alms1Q8K4E0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.76■□□□□ 0.91
Alms1Q8K4E0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.76■□□□□ 0.91
Alms1Q8K4E0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Alms1Q8K4E0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.75■□□□□ 0.91
Alms1Q8K4E0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Alms1Q8K4E0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Alms1Q8K4E0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.75■□□□□ 0.91
Alms1Q8K4E0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Alms1Q8K4E0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Alms1Q8K4E0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Alms1Q8K4E0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Alms1Q8K4E0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.74■□□□□ 0.91
Alms1Q8K4E0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alms1Q8K4E0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alms1Q8K4E0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Alms1Q8K4E0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alms1Q8K4E0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Alms1Q8K4E0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alms1Q8K4E0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Alms1Q8K4E0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Alms1Q8K4E0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alms1Q8K4E0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Alms1Q8K4E0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.72■□□□□ 0.91
Alms1Q8K4E0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alms1Q8K4E0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alms1Q8K4E0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alms1Q8K4E0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alms1Q8K4E0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Alms1Q8K4E0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alms1Q8K4E0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Alms1Q8K4E0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Alms1Q8K4E0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Alms1Q8K4E0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alms1Q8K4E0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.7■□□□□ 0.9
Alms1Q8K4E0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.7■□□□□ 0.9
Alms1Q8K4E0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Alms1Q8K4E0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alms1Q8K4E0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alms1Q8K4E0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alms1Q8K4E0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Alms1Q8K4E0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Alms1Q8K4E0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Alms1Q8K4E0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Alms1Q8K4E0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alms1Q8K4E0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alms1Q8K4E0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alms1Q8K4E0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Alms1Q8K4E0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.69■□□□□ 0.9
Alms1Q8K4E0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Alms1Q8K4E0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Alms1Q8K4E0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Alms1Q8K4E0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alms1Q8K4E0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alms1Q8K4E0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alms1Q8K4E0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Alms1Q8K4E0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.68■□□□□ 0.9
Alms1Q8K4E0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Alms1Q8K4E0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Alms1Q8K4E0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms