Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Mmp28Q8CGV8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Mmp28Q8CGV8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp28Q8CGV8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp28Q8CGV8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp28Q8CGV8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp28Q8CGV8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp28Q8CGV8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mmp28Q8CGV8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp28Q8CGV8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp28Q8CGV8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.81■□□□□ 0.44
Mmp28Q8CGV8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.81■□□□□ 0.44
Mmp28Q8CGV8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Mmp28Q8CGV8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp28Q8CGV8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mmp28Q8CGV8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Mmp28Q8CGV8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp28Q8CGV8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Mmp28Q8CGV8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mmp28Q8CGV8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.8■□□□□ 0.44
Mmp28Q8CGV8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp28Q8CGV8 Gm4799-201ENSMUST00000095396 657 ntBASIC17.79■□□□□ 0.44
Mmp28Q8CGV8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp28Q8CGV8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp28Q8CGV8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mmp28Q8CGV8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Mmp28Q8CGV8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.78■□□□□ 0.44
Mmp28Q8CGV8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp28Q8CGV8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp28Q8CGV8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp28Q8CGV8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp28Q8CGV8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mmp28Q8CGV8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp28Q8CGV8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp28Q8CGV8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp28Q8CGV8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.77■□□□□ 0.44
Mmp28Q8CGV8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.77■□□□□ 0.44
Mmp28Q8CGV8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp28Q8CGV8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp28Q8CGV8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mmp28Q8CGV8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Mmp28Q8CGV8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mmp28Q8CGV8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp28Q8CGV8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp28Q8CGV8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp28Q8CGV8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp28Q8CGV8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp28Q8CGV8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp28Q8CGV8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp28Q8CGV8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mmp28Q8CGV8 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp28Q8CGV8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp28Q8CGV8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp28Q8CGV8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp28Q8CGV8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp28Q8CGV8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp28Q8CGV8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp28Q8CGV8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Mmp28Q8CGV8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp28Q8CGV8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp28Q8CGV8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp28Q8CGV8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp28Q8CGV8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Mmp28Q8CGV8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.72■□□□□ 0.43
Mmp28Q8CGV8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp28Q8CGV8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp28Q8CGV8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Mmp28Q8CGV8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp28Q8CGV8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp28Q8CGV8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp28Q8CGV8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.71■□□□□ 0.43
Mmp28Q8CGV8 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.71■□□□□ 0.43
Mmp28Q8CGV8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp28Q8CGV8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Mmp28Q8CGV8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.7■□□□□ 0.42
Mmp28Q8CGV8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Mmp28Q8CGV8 Mir3960-201ENSMUST00000198213 73 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms