Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Smc2Q8CG48 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Smc2Q8CG48 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.06■■□□□ 1.44
Smc2Q8CG48 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smc2Q8CG48 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smc2Q8CG48 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smc2Q8CG48 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Smc2Q8CG48 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Smc2Q8CG48 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Smc2Q8CG48 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Smc2Q8CG48 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Smc2Q8CG48 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc2Q8CG48 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Smc2Q8CG48 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Smc2Q8CG48 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.04■■□□□ 1.44
Smc2Q8CG48 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc2Q8CG48 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smc2Q8CG48 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Smc2Q8CG48 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smc2Q8CG48 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smc2Q8CG48 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Smc2Q8CG48 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC24.03■■□□□ 1.44
Smc2Q8CG48 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.03■■□□□ 1.44
Smc2Q8CG48 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
Smc2Q8CG48 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Smc2Q8CG48 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smc2Q8CG48 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smc2Q8CG48 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smc2Q8CG48 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smc2Q8CG48 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Smc2Q8CG48 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.02■■□□□ 1.44
Smc2Q8CG48 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smc2Q8CG48 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Smc2Q8CG48 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smc2Q8CG48 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smc2Q8CG48 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smc2Q8CG48 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.01■■□□□ 1.43
Smc2Q8CG48 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Smc2Q8CG48 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smc2Q8CG48 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Smc2Q8CG48 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC24.01■■□□□ 1.43
Smc2Q8CG48 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Smc2Q8CG48 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24■■□□□ 1.43
Smc2Q8CG48 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Smc2Q8CG48 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24■■□□□ 1.43
Smc2Q8CG48 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Smc2Q8CG48 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Smc2Q8CG48 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Smc2Q8CG48 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Smc2Q8CG48 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc2Q8CG48 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc2Q8CG48 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Smc2Q8CG48 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc2Q8CG48 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Smc2Q8CG48 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc2Q8CG48 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smc2Q8CG48 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Smc2Q8CG48 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Smc2Q8CG48 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.97■■□□□ 1.43
Smc2Q8CG48 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.97■■□□□ 1.43
Smc2Q8CG48 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smc2Q8CG48 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC23.97■■□□□ 1.43
Smc2Q8CG48 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.96■■□□□ 1.43
Smc2Q8CG48 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Smc2Q8CG48 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.96■■□□□ 1.43
Smc2Q8CG48 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc2Q8CG48 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc2Q8CG48 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smc2Q8CG48 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.96■■□□□ 1.43
Smc2Q8CG48 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Smc2Q8CG48 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Smc2Q8CG48 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smc2Q8CG48 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smc2Q8CG48 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.95■■□□□ 1.42
Smc2Q8CG48 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc2Q8CG48 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc2Q8CG48 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc2Q8CG48 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smc2Q8CG48 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smc2Q8CG48 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc2Q8CG48 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc2Q8CG48 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Smc2Q8CG48 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.94■■□□□ 1.42
Smc2Q8CG48 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc2Q8CG48 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc2Q8CG48 Gm11847-201ENSMUST00000125165 1119 ntBASIC23.94■■□□□ 1.42
Smc2Q8CG48 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.94■■□□□ 1.42
Smc2Q8CG48 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC23.94■■□□□ 1.42
Smc2Q8CG48 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Smc2Q8CG48 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smc2Q8CG48 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Smc2Q8CG48 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc2Q8CG48 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc2Q8CG48 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc2Q8CG48 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc2Q8CG48 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc2Q8CG48 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smc2Q8CG48 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Smc2Q8CG48 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.93■■□□□ 1.42
Smc2Q8CG48 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms