Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Shisa4Q8CA71 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Shisa4Q8CA71 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
Shisa4Q8CA71 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Shisa4Q8CA71 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Shisa4Q8CA71 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Shisa4Q8CA71 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Shisa4Q8CA71 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Shisa4Q8CA71 Gm9959-201ENSMUST00000068277 390 ntBASIC24.8■■□□□ 1.56
Shisa4Q8CA71 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.8■■□□□ 1.56
Shisa4Q8CA71 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Shisa4Q8CA71 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC24.8■■□□□ 1.56
Shisa4Q8CA71 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Shisa4Q8CA71 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Shisa4Q8CA71 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Shisa4Q8CA71 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Shisa4Q8CA71 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Shisa4Q8CA71 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.79■■□□□ 1.56
Shisa4Q8CA71 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Shisa4Q8CA71 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Shisa4Q8CA71 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Shisa4Q8CA71 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Shisa4Q8CA71 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.78■■□□□ 1.56
Shisa4Q8CA71 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Shisa4Q8CA71 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.78■■□□□ 1.56
Shisa4Q8CA71 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Shisa4Q8CA71 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.78■■□□□ 1.56
Shisa4Q8CA71 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC24.78■■□□□ 1.56
Shisa4Q8CA71 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Shisa4Q8CA71 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Shisa4Q8CA71 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Shisa4Q8CA71 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.77■■□□□ 1.56
Shisa4Q8CA71 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Shisa4Q8CA71 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
Shisa4Q8CA71 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Shisa4Q8CA71 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shisa4Q8CA71 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
Shisa4Q8CA71 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.76■■□□□ 1.55
Shisa4Q8CA71 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.76■■□□□ 1.55
Shisa4Q8CA71 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
Shisa4Q8CA71 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shisa4Q8CA71 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shisa4Q8CA71 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shisa4Q8CA71 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shisa4Q8CA71 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Shisa4Q8CA71 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.75■■□□□ 1.55
Shisa4Q8CA71 AC116713.1-201ENSMUST00000215074 430 ntBASIC24.75■■□□□ 1.55
Shisa4Q8CA71 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
Shisa4Q8CA71 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.75■■□□□ 1.55
Shisa4Q8CA71 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Shisa4Q8CA71 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Shisa4Q8CA71 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.74■■□□□ 1.55
Shisa4Q8CA71 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
Shisa4Q8CA71 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
Shisa4Q8CA71 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Shisa4Q8CA71 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Shisa4Q8CA71 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
Shisa4Q8CA71 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.73■■□□□ 1.55
Shisa4Q8CA71 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
Shisa4Q8CA71 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Shisa4Q8CA71 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Shisa4Q8CA71 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Shisa4Q8CA71 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Shisa4Q8CA71 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.72■■□□□ 1.55
Shisa4Q8CA71 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Shisa4Q8CA71 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.71■■□□□ 1.55
Shisa4Q8CA71 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.71■■□□□ 1.55
Shisa4Q8CA71 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Shisa4Q8CA71 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
Shisa4Q8CA71 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Shisa4Q8CA71 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.7■■□□□ 1.54
Shisa4Q8CA71 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Shisa4Q8CA71 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Shisa4Q8CA71 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Shisa4Q8CA71 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Shisa4Q8CA71 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Shisa4Q8CA71 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
Shisa4Q8CA71 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Shisa4Q8CA71 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Shisa4Q8CA71 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Shisa4Q8CA71 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.69■■□□□ 1.54
Shisa4Q8CA71 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Shisa4Q8CA71 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Shisa4Q8CA71 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Shisa4Q8CA71 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.68■■□□□ 1.54
Shisa4Q8CA71 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.68■■□□□ 1.54
Shisa4Q8CA71 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.68■■□□□ 1.54
Shisa4Q8CA71 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.68■■□□□ 1.54
Shisa4Q8CA71 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms