Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsfm13Q8BXS2 Cap2-205ENSMUST00000225824 1634 ntBASIC18.7■□□□□ 0.58
Tnfsfm13Q8BXS2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsfm13Q8BXS2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnfsfm13Q8BXS2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tnfsfm13Q8BXS2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.69■□□□□ 0.58
Tnfsfm13Q8BXS2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.69■□□□□ 0.58
Tnfsfm13Q8BXS2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsfm13Q8BXS2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsfm13Q8BXS2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsfm13Q8BXS2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Tnfsfm13Q8BXS2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsfm13Q8BXS2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnfsfm13Q8BXS2 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.69■□□□□ 0.58
Tnfsfm13Q8BXS2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsfm13Q8BXS2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsfm13Q8BXS2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Tnfsfm13Q8BXS2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsfm13Q8BXS2 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.68■□□□□ 0.58
Tnfsfm13Q8BXS2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.68■□□□□ 0.58
Tnfsfm13Q8BXS2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsfm13Q8BXS2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnfsfm13Q8BXS2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.68■□□□□ 0.58
Tnfsfm13Q8BXS2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsfm13Q8BXS2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsfm13Q8BXS2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Tnfsfm13Q8BXS2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsfm13Q8BXS2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsfm13Q8BXS2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsfm13Q8BXS2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tnfsfm13Q8BXS2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tnfsfm13Q8BXS2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsfm13Q8BXS2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsfm13Q8BXS2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tnfsfm13Q8BXS2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsfm13Q8BXS2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsfm13Q8BXS2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsfm13Q8BXS2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsfm13Q8BXS2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.65■□□□□ 0.58
Tnfsfm13Q8BXS2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsfm13Q8BXS2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfsfm13Q8BXS2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tnfsfm13Q8BXS2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tnfsfm13Q8BXS2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tnfsfm13Q8BXS2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Tnfsfm13Q8BXS2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsfm13Q8BXS2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Tnfsfm13Q8BXS2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.64■□□□□ 0.57
Tnfsfm13Q8BXS2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.64■□□□□ 0.57
Tnfsfm13Q8BXS2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsfm13Q8BXS2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfsfm13Q8BXS2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Tnfsfm13Q8BXS2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsfm13Q8BXS2 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.63■□□□□ 0.57
Tnfsfm13Q8BXS2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsfm13Q8BXS2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfsfm13Q8BXS2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsfm13Q8BXS2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsfm13Q8BXS2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsfm13Q8BXS2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.62■□□□□ 0.57
Tnfsfm13Q8BXS2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnfsfm13Q8BXS2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsfm13Q8BXS2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfsfm13Q8BXS2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsfm13Q8BXS2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsfm13Q8BXS2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfsfm13Q8BXS2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tnfsfm13Q8BXS2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.6■□□□□ 0.57
Tnfsfm13Q8BXS2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tnfsfm13Q8BXS2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfsfm13Q8BXS2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfsfm13Q8BXS2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tnfsfm13Q8BXS2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfsfm13Q8BXS2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfsfm13Q8BXS2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms