Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ush1gQ80T11 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ush1gQ80T11 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ush1gQ80T11 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ush1gQ80T11 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ush1gQ80T11 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ush1gQ80T11 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ush1gQ80T11 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ush1gQ80T11 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ush1gQ80T11 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ush1gQ80T11 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.04■■□□□ 1.28
Ush1gQ80T11 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ush1gQ80T11 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.03■■□□□ 1.28
Ush1gQ80T11 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ush1gQ80T11 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.03■■□□□ 1.28
Ush1gQ80T11 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.03■■□□□ 1.28
Ush1gQ80T11 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ush1gQ80T11 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ush1gQ80T11 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Ush1gQ80T11 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ush1gQ80T11 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ush1gQ80T11 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ush1gQ80T11 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.02■■□□□ 1.28
Ush1gQ80T11 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.02■■□□□ 1.28
Ush1gQ80T11 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC23.02■■□□□ 1.28
Ush1gQ80T11 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ush1gQ80T11 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ush1gQ80T11 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ush1gQ80T11 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ush1gQ80T11 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.01■■□□□ 1.27
Ush1gQ80T11 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ush1gQ80T11 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.01■■□□□ 1.27
Ush1gQ80T11 Gm27454-201ENSMUST00000185090 204 ntBASIC23.01■■□□□ 1.27
Ush1gQ80T11 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ush1gQ80T11 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ush1gQ80T11 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ush1gQ80T11 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Ush1gQ80T11 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ush1gQ80T11 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Ush1gQ80T11 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ush1gQ80T11 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ush1gQ80T11 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ush1gQ80T11 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Ush1gQ80T11 Golgb1-201ENSMUST00000023534 498 ntBASIC22.99■■□□□ 1.27
Ush1gQ80T11 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ush1gQ80T11 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.99■■□□□ 1.27
Ush1gQ80T11 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ush1gQ80T11 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.98■■□□□ 1.27
Ush1gQ80T11 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ush1gQ80T11 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ush1gQ80T11 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ush1gQ80T11 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
Ush1gQ80T11 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ush1gQ80T11 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ush1gQ80T11 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ush1gQ80T11 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ush1gQ80T11 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ush1gQ80T11 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ush1gQ80T11 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ush1gQ80T11 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ush1gQ80T11 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ush1gQ80T11 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.97■■□□□ 1.27
Ush1gQ80T11 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ush1gQ80T11 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ush1gQ80T11 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ush1gQ80T11 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ush1gQ80T11 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ush1gQ80T11 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.96■■□□□ 1.27
Ush1gQ80T11 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.96■■□□□ 1.27
Ush1gQ80T11 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ush1gQ80T11 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ush1gQ80T11 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Ush1gQ80T11 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Ush1gQ80T11 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Ush1gQ80T11 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Ush1gQ80T11 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ush1gQ80T11 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.95■■□□□ 1.26
Ush1gQ80T11 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.95■■□□□ 1.26
Ush1gQ80T11 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.95■■□□□ 1.26
Ush1gQ80T11 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ush1gQ80T11 Gm45417-201ENSMUST00000209533 758 ntBASIC22.95■■□□□ 1.26
Ush1gQ80T11 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ush1gQ80T11 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ush1gQ80T11 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ush1gQ80T11 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Ush1gQ80T11 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ush1gQ80T11 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ush1gQ80T11 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ush1gQ80T11 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ush1gQ80T11 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.94■■□□□ 1.26
Ush1gQ80T11 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ush1gQ80T11 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ush1gQ80T11 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ush1gQ80T11 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ush1gQ80T11 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Ush1gQ80T11 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.93■■□□□ 1.26
Ush1gQ80T11 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Ush1gQ80T11 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ush1gQ80T11 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ush1gQ80T11 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms