Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn4bQ7M729 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Scn4bQ7M729 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Scn4bQ7M729 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn4bQ7M729 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Scn4bQ7M729 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn4bQ7M729 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn4bQ7M729 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn4bQ7M729 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn4bQ7M729 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn4bQ7M729 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.47■□□□□ 0.87
Scn4bQ7M729 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn4bQ7M729 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.47■□□□□ 0.87
Scn4bQ7M729 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn4bQ7M729 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn4bQ7M729 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn4bQ7M729 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.46■□□□□ 0.87
Scn4bQ7M729 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn4bQ7M729 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn4bQ7M729 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn4bQ7M729 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn4bQ7M729 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn4bQ7M729 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scn4bQ7M729 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Scn4bQ7M729 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Scn4bQ7M729 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Scn4bQ7M729 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.45■□□□□ 0.86
Scn4bQ7M729 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.45■□□□□ 0.86
Scn4bQ7M729 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn4bQ7M729 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Scn4bQ7M729 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn4bQ7M729 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Scn4bQ7M729 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn4bQ7M729 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.44■□□□□ 0.86
Scn4bQ7M729 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.44■□□□□ 0.86
Scn4bQ7M729 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn4bQ7M729 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn4bQ7M729 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.44■□□□□ 0.86
Scn4bQ7M729 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scn4bQ7M729 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn4bQ7M729 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn4bQ7M729 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Scn4bQ7M729 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn4bQ7M729 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.43■□□□□ 0.86
Scn4bQ7M729 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn4bQ7M729 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn4bQ7M729 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Scn4bQ7M729 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn4bQ7M729 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Scn4bQ7M729 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn4bQ7M729 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.42■□□□□ 0.86
Scn4bQ7M729 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn4bQ7M729 Gm45444-201ENSMUST00000211394 898 ntBASIC20.42■□□□□ 0.86
Scn4bQ7M729 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn4bQ7M729 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn4bQ7M729 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn4bQ7M729 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn4bQ7M729 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn4bQ7M729 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.41■□□□□ 0.86
Scn4bQ7M729 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.41■□□□□ 0.86
Scn4bQ7M729 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn4bQ7M729 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn4bQ7M729 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn4bQ7M729 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Scn4bQ7M729 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn4bQ7M729 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn4bQ7M729 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scn4bQ7M729 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Scn4bQ7M729 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn4bQ7M729 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Scn4bQ7M729 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Scn4bQ7M729 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.39■□□□□ 0.86
Scn4bQ7M729 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scn4bQ7M729 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scn4bQ7M729 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scn4bQ7M729 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Scn4bQ7M729 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scn4bQ7M729 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn4bQ7M729 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.39■□□□□ 0.85
Scn4bQ7M729 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scn4bQ7M729 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn4bQ7M729 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Scn4bQ7M729 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn4bQ7M729 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scn4bQ7M729 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scn4bQ7M729 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn4bQ7M729 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scn4bQ7M729 Gm13238-201ENSMUST00000117655 780 ntBASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms