Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cachd1Q6PDJ1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cachd1Q6PDJ1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cachd1Q6PDJ1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cachd1Q6PDJ1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cachd1Q6PDJ1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cachd1Q6PDJ1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cachd1Q6PDJ1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.36■■□□□ 1.01
Cachd1Q6PDJ1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.36■■□□□ 1.01
Cachd1Q6PDJ1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cachd1Q6PDJ1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.36■■□□□ 1.01
Cachd1Q6PDJ1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cachd1Q6PDJ1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cachd1Q6PDJ1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cachd1Q6PDJ1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cachd1Q6PDJ1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Cachd1Q6PDJ1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.35■■□□□ 1.01
Cachd1Q6PDJ1 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.35■■□□□ 1.01
Cachd1Q6PDJ1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cachd1Q6PDJ1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cachd1Q6PDJ1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cachd1Q6PDJ1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cachd1Q6PDJ1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cachd1Q6PDJ1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cachd1Q6PDJ1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cachd1Q6PDJ1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cachd1Q6PDJ1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cachd1Q6PDJ1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cachd1Q6PDJ1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cachd1Q6PDJ1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cachd1Q6PDJ1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.33■■□□□ 1.01
Cachd1Q6PDJ1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cachd1Q6PDJ1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.33■■□□□ 1.01
Cachd1Q6PDJ1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Cachd1Q6PDJ1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.33■■□□□ 1
Cachd1Q6PDJ1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cachd1Q6PDJ1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cachd1Q6PDJ1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cachd1Q6PDJ1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.32■■□□□ 1
Cachd1Q6PDJ1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cachd1Q6PDJ1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cachd1Q6PDJ1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Cachd1Q6PDJ1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cachd1Q6PDJ1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cachd1Q6PDJ1 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.31■■□□□ 1
Cachd1Q6PDJ1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.31■■□□□ 1
Cachd1Q6PDJ1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Cachd1Q6PDJ1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cachd1Q6PDJ1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Cachd1Q6PDJ1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cachd1Q6PDJ1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cachd1Q6PDJ1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.3■■□□□ 1
Cachd1Q6PDJ1 Gm12933-201ENSMUST00000120203 872 ntBASIC21.3■■□□□ 1
Cachd1Q6PDJ1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cachd1Q6PDJ1 Gm43060-201ENSMUST00000200621 289 ntBASIC21.3■■□□□ 1
Cachd1Q6PDJ1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.3■■□□□ 1
Cachd1Q6PDJ1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cachd1Q6PDJ1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cachd1Q6PDJ1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cachd1Q6PDJ1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cachd1Q6PDJ1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cachd1Q6PDJ1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cachd1Q6PDJ1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cachd1Q6PDJ1 AV356131-201ENSMUST00000206201 750 ntBASIC21.29■■□□□ 1
Cachd1Q6PDJ1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cachd1Q6PDJ1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Cachd1Q6PDJ1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Cachd1Q6PDJ1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
Cachd1Q6PDJ1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.28■■□□□ 1
Cachd1Q6PDJ1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cachd1Q6PDJ1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cachd1Q6PDJ1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cachd1Q6PDJ1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cachd1Q6PDJ1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cachd1Q6PDJ1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cachd1Q6PDJ1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.27■■□□□ 1
Cachd1Q6PDJ1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cachd1Q6PDJ1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Cachd1Q6PDJ1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Cachd1Q6PDJ1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cachd1Q6PDJ1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cachd1Q6PDJ1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cachd1Q6PDJ1 Gm43173-201ENSMUST00000202246 593 ntBASIC21.26■□□□□ 0.99
Cachd1Q6PDJ1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cachd1Q6PDJ1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Cachd1Q6PDJ1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cachd1Q6PDJ1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cachd1Q6PDJ1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cachd1Q6PDJ1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Cachd1Q6PDJ1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Cachd1Q6PDJ1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cachd1Q6PDJ1 Gm10653-202ENSMUST00000139570 835 ntBASIC21.24■□□□□ 0.99
Cachd1Q6PDJ1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Cachd1Q6PDJ1 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.24■□□□□ 0.99
Cachd1Q6PDJ1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cachd1Q6PDJ1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cachd1Q6PDJ1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cachd1Q6PDJ1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cachd1Q6PDJ1 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.23■□□□□ 0.99
Cachd1Q6PDJ1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms