Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Tnfaip3Q60769 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfaip3Q60769 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfaip3Q60769 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Tnfaip3Q60769 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfaip3Q60769 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfaip3Q60769 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfaip3Q60769 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tnfaip3Q60769 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Tnfaip3Q60769 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfaip3Q60769 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfaip3Q60769 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfaip3Q60769 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfaip3Q60769 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.76■□□□□ 0.75
Tnfaip3Q60769 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.76■□□□□ 0.75
Tnfaip3Q60769 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfaip3Q60769 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfaip3Q60769 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfaip3Q60769 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfaip3Q60769 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfaip3Q60769 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.75■□□□□ 0.75
Tnfaip3Q60769 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfaip3Q60769 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.75■□□□□ 0.75
Tnfaip3Q60769 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Tnfaip3Q60769 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfaip3Q60769 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfaip3Q60769 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfaip3Q60769 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Tnfaip3Q60769 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfaip3Q60769 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfaip3Q60769 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfaip3Q60769 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfaip3Q60769 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfaip3Q60769 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfaip3Q60769 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfaip3Q60769 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.73■□□□□ 0.75
Tnfaip3Q60769 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfaip3Q60769 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfaip3Q60769 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfaip3Q60769 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Tnfaip3Q60769 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Tnfaip3Q60769 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfaip3Q60769 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfaip3Q60769 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfaip3Q60769 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfaip3Q60769 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.71■□□□□ 0.75
Tnfaip3Q60769 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfaip3Q60769 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfaip3Q60769 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.7■□□□□ 0.74
Tnfaip3Q60769 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfaip3Q60769 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.7■□□□□ 0.74
Tnfaip3Q60769 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfaip3Q60769 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfaip3Q60769 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfaip3Q60769 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.69■□□□□ 0.74
Tnfaip3Q60769 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tnfaip3Q60769 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.69■□□□□ 0.74
Tnfaip3Q60769 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.69■□□□□ 0.74
Tnfaip3Q60769 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfaip3Q60769 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.69■□□□□ 0.74
Tnfaip3Q60769 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfaip3Q60769 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfaip3Q60769 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfaip3Q60769 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfaip3Q60769 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Tnfaip3Q60769 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.68■□□□□ 0.74
Tnfaip3Q60769 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfaip3Q60769 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfaip3Q60769 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Tnfaip3Q60769 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.67■□□□□ 0.74
Tnfaip3Q60769 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.67■□□□□ 0.74
Tnfaip3Q60769 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfaip3Q60769 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfaip3Q60769 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfaip3Q60769 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms