Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ClpbQ60649 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ClpbQ60649 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ClpbQ60649 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ClpbQ60649 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ClpbQ60649 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.14■□□□□ 0.81
ClpbQ60649 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ClpbQ60649 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ClpbQ60649 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
ClpbQ60649 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ClpbQ60649 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.12■□□□□ 0.81
ClpbQ60649 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
ClpbQ60649 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ClpbQ60649 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ClpbQ60649 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ClpbQ60649 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ClpbQ60649 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ClpbQ60649 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ClpbQ60649 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ClpbQ60649 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ClpbQ60649 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ClpbQ60649 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ClpbQ60649 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ClpbQ60649 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ClpbQ60649 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ClpbQ60649 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ClpbQ60649 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.1■□□□□ 0.81
ClpbQ60649 Gm10232-201ENSMUST00000089221 720 ntBASIC20.1■□□□□ 0.81
ClpbQ60649 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.1■□□□□ 0.81
ClpbQ60649 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ClpbQ60649 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ClpbQ60649 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ClpbQ60649 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ClpbQ60649 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.09■□□□□ 0.81
ClpbQ60649 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ClpbQ60649 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ClpbQ60649 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.09■□□□□ 0.81
ClpbQ60649 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ClpbQ60649 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ClpbQ60649 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ClpbQ60649 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ClpbQ60649 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.08■□□□□ 0.81
ClpbQ60649 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ClpbQ60649 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ClpbQ60649 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ClpbQ60649 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
ClpbQ60649 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ClpbQ60649 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.07■□□□□ 0.8
ClpbQ60649 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ClpbQ60649 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ClpbQ60649 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.06■□□□□ 0.8
ClpbQ60649 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ClpbQ60649 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ClpbQ60649 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ClpbQ60649 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ClpbQ60649 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ClpbQ60649 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ClpbQ60649 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ClpbQ60649 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ClpbQ60649 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
ClpbQ60649 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ClpbQ60649 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ClpbQ60649 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ClpbQ60649 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ClpbQ60649 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ClpbQ60649 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.04■□□□□ 0.8
ClpbQ60649 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.04■□□□□ 0.8
ClpbQ60649 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.04■□□□□ 0.8
ClpbQ60649 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.04■□□□□ 0.8
ClpbQ60649 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ClpbQ60649 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ClpbQ60649 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ClpbQ60649 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ClpbQ60649 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.03■□□□□ 0.8
ClpbQ60649 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClpbQ60649 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ClpbQ60649 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ClpbQ60649 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClpbQ60649 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClpbQ60649 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ClpbQ60649 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.03■□□□□ 0.8
ClpbQ60649 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ClpbQ60649 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.03■□□□□ 0.8
ClpbQ60649 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClpbQ60649 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ClpbQ60649 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.03■□□□□ 0.8
ClpbQ60649 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ClpbQ60649 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClpbQ60649 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClpbQ60649 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ClpbQ60649 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ClpbQ60649 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ClpbQ60649 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ClpbQ60649 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ClpbQ60649 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ClpbQ60649 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ClpbQ60649 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ClpbQ60649 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.01■□□□□ 0.79
ClpbQ60649 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ClpbQ60649 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms