Protein–RNA interactions for Protein: Q3UM89

Foxr2, Forkhead box protein R2, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr2Q3UM89 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.85■□□□□ 0.61
Foxr2Q3UM89 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxr2Q3UM89 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Foxr2Q3UM89 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxr2Q3UM89 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.84■□□□□ 0.61
Foxr2Q3UM89 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.84■□□□□ 0.61
Foxr2Q3UM89 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.84■□□□□ 0.61
Foxr2Q3UM89 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.84■□□□□ 0.61
Foxr2Q3UM89 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxr2Q3UM89 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxr2Q3UM89 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxr2Q3UM89 Gm13238-201ENSMUST00000117655 780 ntBASIC18.83■□□□□ 0.6
Foxr2Q3UM89 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Foxr2Q3UM89 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Foxr2Q3UM89 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxr2Q3UM89 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxr2Q3UM89 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Foxr2Q3UM89 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Foxr2Q3UM89 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxr2Q3UM89 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.82■□□□□ 0.6
Foxr2Q3UM89 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxr2Q3UM89 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxr2Q3UM89 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Foxr2Q3UM89 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxr2Q3UM89 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxr2Q3UM89 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxr2Q3UM89 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxr2Q3UM89 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxr2Q3UM89 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Foxr2Q3UM89 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.81■□□□□ 0.6
Foxr2Q3UM89 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Foxr2Q3UM89 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.81■□□□□ 0.6
Foxr2Q3UM89 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxr2Q3UM89 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Foxr2Q3UM89 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxr2Q3UM89 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.8■□□□□ 0.6
Foxr2Q3UM89 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Foxr2Q3UM89 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxr2Q3UM89 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxr2Q3UM89 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxr2Q3UM89 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxr2Q3UM89 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Foxr2Q3UM89 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxr2Q3UM89 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxr2Q3UM89 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxr2Q3UM89 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxr2Q3UM89 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxr2Q3UM89 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Foxr2Q3UM89 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxr2Q3UM89 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxr2Q3UM89 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Foxr2Q3UM89 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxr2Q3UM89 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Foxr2Q3UM89 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Foxr2Q3UM89 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxr2Q3UM89 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxr2Q3UM89 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxr2Q3UM89 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.76■□□□□ 0.59
Foxr2Q3UM89 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Foxr2Q3UM89 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxr2Q3UM89 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Foxr2Q3UM89 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.75■□□□□ 0.59
Foxr2Q3UM89 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.75■□□□□ 0.59
Foxr2Q3UM89 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxr2Q3UM89 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxr2Q3UM89 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxr2Q3UM89 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxr2Q3UM89 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.74■□□□□ 0.59
Foxr2Q3UM89 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxr2Q3UM89 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxr2Q3UM89 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.74■□□□□ 0.59
Foxr2Q3UM89 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxr2Q3UM89 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Foxr2Q3UM89 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxr2Q3UM89 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms