Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Limch1Q3UH68 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Limch1Q3UH68 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Limch1Q3UH68 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
Limch1Q3UH68 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Limch1Q3UH68 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Limch1Q3UH68 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.77■■□□□ 1.56
Limch1Q3UH68 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Limch1Q3UH68 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Limch1Q3UH68 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24.76■■□□□ 1.55
Limch1Q3UH68 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Limch1Q3UH68 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
Limch1Q3UH68 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Limch1Q3UH68 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Limch1Q3UH68 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
Limch1Q3UH68 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Limch1Q3UH68 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Limch1Q3UH68 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
Limch1Q3UH68 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Limch1Q3UH68 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
Limch1Q3UH68 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Limch1Q3UH68 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Limch1Q3UH68 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Limch1Q3UH68 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Limch1Q3UH68 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Limch1Q3UH68 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Limch1Q3UH68 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Limch1Q3UH68 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Limch1Q3UH68 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Limch1Q3UH68 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
Limch1Q3UH68 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Limch1Q3UH68 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Limch1Q3UH68 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.72■■□□□ 1.55
Limch1Q3UH68 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Limch1Q3UH68 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Limch1Q3UH68 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.71■■□□□ 1.55
Limch1Q3UH68 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Limch1Q3UH68 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.71■■□□□ 1.55
Limch1Q3UH68 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC24.71■■□□□ 1.55
Limch1Q3UH68 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Limch1Q3UH68 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.7■■□□□ 1.54
Limch1Q3UH68 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Limch1Q3UH68 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Limch1Q3UH68 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Limch1Q3UH68 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Limch1Q3UH68 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Limch1Q3UH68 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.69■■□□□ 1.54
Limch1Q3UH68 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Limch1Q3UH68 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC24.69■■□□□ 1.54
Limch1Q3UH68 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Limch1Q3UH68 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Limch1Q3UH68 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Limch1Q3UH68 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC24.68■■□□□ 1.54
Limch1Q3UH68 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Limch1Q3UH68 Gm10232-201ENSMUST00000089221 720 ntBASIC24.68■■□□□ 1.54
Limch1Q3UH68 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
Limch1Q3UH68 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
Limch1Q3UH68 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Limch1Q3UH68 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Limch1Q3UH68 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Limch1Q3UH68 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Limch1Q3UH68 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Limch1Q3UH68 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Limch1Q3UH68 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Limch1Q3UH68 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Limch1Q3UH68 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Limch1Q3UH68 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Limch1Q3UH68 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
Limch1Q3UH68 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Limch1Q3UH68 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Limch1Q3UH68 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Limch1Q3UH68 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Limch1Q3UH68 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Limch1Q3UH68 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Limch1Q3UH68 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC24.65■■□□□ 1.54
Limch1Q3UH68 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
Limch1Q3UH68 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Limch1Q3UH68 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
Limch1Q3UH68 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Limch1Q3UH68 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Limch1Q3UH68 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Limch1Q3UH68 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Limch1Q3UH68 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Limch1Q3UH68 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Limch1Q3UH68 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Limch1Q3UH68 Gm6277-202ENSMUST00000224036 2779 ntBASIC24.62■■□□□ 1.53
Limch1Q3UH68 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
Limch1Q3UH68 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Limch1Q3UH68 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Limch1Q3UH68 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Limch1Q3UH68 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Limch1Q3UH68 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Limch1Q3UH68 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Limch1Q3UH68 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Limch1Q3UH68 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Limch1Q3UH68 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Limch1Q3UH68 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Limch1Q3UH68 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.61■■□□□ 1.53
Limch1Q3UH68 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Limch1Q3UH68 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms