Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Xrra1Q3U3V8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xrra1Q3U3V8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xrra1Q3U3V8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xrra1Q3U3V8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Xrra1Q3U3V8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Xrra1Q3U3V8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Xrra1Q3U3V8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Xrra1Q3U3V8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Xrra1Q3U3V8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Xrra1Q3U3V8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.04■□□□□ 0.8
Xrra1Q3U3V8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Xrra1Q3U3V8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Xrra1Q3U3V8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.04■□□□□ 0.8
Xrra1Q3U3V8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Xrra1Q3U3V8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xrra1Q3U3V8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xrra1Q3U3V8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xrra1Q3U3V8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xrra1Q3U3V8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xrra1Q3U3V8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.03■□□□□ 0.8
Xrra1Q3U3V8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xrra1Q3U3V8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Xrra1Q3U3V8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.03■□□□□ 0.8
Xrra1Q3U3V8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Xrra1Q3U3V8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Xrra1Q3U3V8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Xrra1Q3U3V8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Xrra1Q3U3V8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Xrra1Q3U3V8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.02■□□□□ 0.8
Xrra1Q3U3V8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Xrra1Q3U3V8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Xrra1Q3U3V8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Xrra1Q3U3V8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Xrra1Q3U3V8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Xrra1Q3U3V8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20■□□□□ 0.79
Xrra1Q3U3V8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Xrra1Q3U3V8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20■□□□□ 0.79
Xrra1Q3U3V8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Xrra1Q3U3V8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20■□□□□ 0.79
Xrra1Q3U3V8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20■□□□□ 0.79
Xrra1Q3U3V8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Xrra1Q3U3V8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20■□□□□ 0.79
Xrra1Q3U3V8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Xrra1Q3U3V8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Xrra1Q3U3V8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Xrra1Q3U3V8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Xrra1Q3U3V8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Xrra1Q3U3V8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
Xrra1Q3U3V8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Xrra1Q3U3V8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.99■□□□□ 0.79
Xrra1Q3U3V8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Xrra1Q3U3V8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Xrra1Q3U3V8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Xrra1Q3U3V8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Xrra1Q3U3V8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Xrra1Q3U3V8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Xrra1Q3U3V8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.98■□□□□ 0.79
Xrra1Q3U3V8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Xrra1Q3U3V8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Xrra1Q3U3V8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Xrra1Q3U3V8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Xrra1Q3U3V8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
Xrra1Q3U3V8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Xrra1Q3U3V8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Xrra1Q3U3V8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Xrra1Q3U3V8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Xrra1Q3U3V8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Xrra1Q3U3V8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Xrra1Q3U3V8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Xrra1Q3U3V8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Xrra1Q3U3V8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms