Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdh6P97326 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Cdh6P97326 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh6P97326 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh6P97326 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Cdh6P97326 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh6P97326 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh6P97326 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.38■■□□□ 1.01
Cdh6P97326 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh6P97326 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdh6P97326 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh6P97326 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh6P97326 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh6P97326 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh6P97326 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Cdh6P97326 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.37■■□□□ 1.01
Cdh6P97326 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cdh6P97326 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdh6P97326 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh6P97326 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdh6P97326 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh6P97326 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh6P97326 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdh6P97326 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Cdh6P97326 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.35■■□□□ 1.01
Cdh6P97326 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh6P97326 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh6P97326 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.34■■□□□ 1.01
Cdh6P97326 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh6P97326 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh6P97326 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh6P97326 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdh6P97326 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh6P97326 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Cdh6P97326 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdh6P97326 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.33■■□□□ 1.01
Cdh6P97326 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.33■■□□□ 1
Cdh6P97326 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.33■■□□□ 1
Cdh6P97326 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.32■■□□□ 1
Cdh6P97326 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Cdh6P97326 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cdh6P97326 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Cdh6P97326 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh6P97326 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.32■■□□□ 1
Cdh6P97326 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.32■■□□□ 1
Cdh6P97326 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdh6P97326 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cdh6P97326 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.32■■□□□ 1
Cdh6P97326 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.31■■□□□ 1
Cdh6P97326 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
Cdh6P97326 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cdh6P97326 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh6P97326 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh6P97326 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Cdh6P97326 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh6P97326 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
Cdh6P97326 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh6P97326 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh6P97326 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cdh6P97326 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cdh6P97326 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh6P97326 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.29■■□□□ 1
Cdh6P97326 Gm15546-201ENSMUST00000122095 826 ntBASIC21.29■■□□□ 1
Cdh6P97326 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.29■■□□□ 1
Cdh6P97326 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh6P97326 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh6P97326 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh6P97326 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh6P97326 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh6P97326 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cdh6P97326 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh6P97326 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cdh6P97326 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.28■■□□□ 1
Cdh6P97326 Gm15820-201ENSMUST00000201566 728 ntBASIC21.28■■□□□ 1
Cdh6P97326 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.28■■□□□ 1
Cdh6P97326 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh6P97326 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh6P97326 Gm10399-202ENSMUST00000202768 748 ntBASIC21.27■■□□□ 1
Cdh6P97326 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh6P97326 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh6P97326 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh6P97326 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cdh6P97326 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cdh6P97326 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cdh6P97326 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cdh6P97326 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh6P97326 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh6P97326 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh6P97326 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh6P97326 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh6P97326 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh6P97326 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh6P97326 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh6P97326 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cdh6P97326 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.25■□□□□ 0.99
Cdh6P97326 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh6P97326 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cdh6P97326 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh6P97326 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh6P97326 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms