Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.95■□□□□ 0.94
Ldb1P70662 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ldb1P70662 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ldb1P70662 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ldb1P70662 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ldb1P70662 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ldb1P70662 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.95■□□□□ 0.94
Ldb1P70662 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ldb1P70662 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ldb1P70662 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ldb1P70662 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ldb1P70662 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ldb1P70662 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ldb1P70662 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ldb1P70662 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ldb1P70662 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ldb1P70662 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb1P70662 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Ldb1P70662 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb1P70662 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb1P70662 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ldb1P70662 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb1P70662 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb1P70662 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb1P70662 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb1P70662 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ldb1P70662 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb1P70662 Gm5921-201ENSMUST00000075898 882 ntBASIC20.92■□□□□ 0.94
Ldb1P70662 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb1P70662 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb1P70662 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb1P70662 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ldb1P70662 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ldb1P70662 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb1P70662 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb1P70662 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb1P70662 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb1P70662 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb1P70662 Gm45444-201ENSMUST00000211394 898 ntBASIC20.91■□□□□ 0.94
Ldb1P70662 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb1P70662 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb1P70662 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ldb1P70662 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb1P70662 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb1P70662 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb1P70662 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb1P70662 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb1P70662 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ldb1P70662 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ldb1P70662 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ldb1P70662 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ldb1P70662 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ldb1P70662 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.89■□□□□ 0.93
Ldb1P70662 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ldb1P70662 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ldb1P70662 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ldb1P70662 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Ldb1P70662 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ldb1P70662 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.88■□□□□ 0.93
Ldb1P70662 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Ldb1P70662 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Ldb1P70662 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ldb1P70662 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ldb1P70662 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ldb1P70662 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ldb1P70662 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ldb1P70662 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb1P70662 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ldb1P70662 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb1P70662 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.87■□□□□ 0.93
Ldb1P70662 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ldb1P70662 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ldb1P70662 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ldb1P70662 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ldb1P70662 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ldb1P70662 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.86■□□□□ 0.93
Ldb1P70662 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ldb1P70662 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ldb1P70662 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ldb1P70662 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ldb1P70662 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ldb1P70662 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
Ldb1P70662 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.85■□□□□ 0.93
Ldb1P70662 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ldb1P70662 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Ldb1P70662 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ldb1P70662 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ldb1P70662 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb1P70662 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb1P70662 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Ldb1P70662 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb1P70662 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.84■□□□□ 0.93
Ldb1P70662 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb1P70662 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb1P70662 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ldb1P70662 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ldb1P70662 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.83■□□□□ 0.93
Ldb1P70662 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ldb1P70662 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ldb1P70662 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms