Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atxn1P54254 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Atxn1P54254 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.87■□□□□ 0.93
Atxn1P54254 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn1P54254 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn1P54254 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn1P54254 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.87■□□□□ 0.93
Atxn1P54254 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Atxn1P54254 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn1P54254 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atxn1P54254 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn1P54254 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn1P54254 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Atxn1P54254 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn1P54254 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn1P54254 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.86■□□□□ 0.93
Atxn1P54254 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn1P54254 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atxn1P54254 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn1P54254 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn1P54254 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn1P54254 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Atxn1P54254 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Atxn1P54254 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn1P54254 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Atxn1P54254 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Atxn1P54254 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atxn1P54254 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Atxn1P54254 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.85■□□□□ 0.93
Atxn1P54254 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn1P54254 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Atxn1P54254 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Atxn1P54254 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn1P54254 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn1P54254 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.84■□□□□ 0.93
Atxn1P54254 Gm6139-201ENSMUST00000079261 882 ntBASIC20.84■□□□□ 0.93
Atxn1P54254 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Atxn1P54254 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn1P54254 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn1P54254 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atxn1P54254 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Atxn1P54254 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.83■□□□□ 0.93
Atxn1P54254 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atxn1P54254 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Atxn1P54254 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.83■□□□□ 0.92
Atxn1P54254 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atxn1P54254 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atxn1P54254 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Atxn1P54254 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atxn1P54254 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atxn1P54254 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.82■□□□□ 0.92
Atxn1P54254 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.82■□□□□ 0.92
Atxn1P54254 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atxn1P54254 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Atxn1P54254 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Atxn1P54254 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atxn1P54254 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atxn1P54254 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.81■□□□□ 0.92
Atxn1P54254 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atxn1P54254 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.81■□□□□ 0.92
Atxn1P54254 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.81■□□□□ 0.92
Atxn1P54254 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.81■□□□□ 0.92
Atxn1P54254 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atxn1P54254 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atxn1P54254 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Atxn1P54254 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atxn1P54254 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atxn1P54254 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.8■□□□□ 0.92
Atxn1P54254 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.8■□□□□ 0.92
Atxn1P54254 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atxn1P54254 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atxn1P54254 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Atxn1P54254 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atxn1P54254 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Atxn1P54254 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.79■□□□□ 0.92
Atxn1P54254 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Atxn1P54254 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atxn1P54254 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Atxn1P54254 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.79■□□□□ 0.92
Atxn1P54254 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Atxn1P54254 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.79■□□□□ 0.92
Atxn1P54254 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.79■□□□□ 0.92
Atxn1P54254 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.79■□□□□ 0.92
Atxn1P54254 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atxn1P54254 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atxn1P54254 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Atxn1P54254 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.78■□□□□ 0.92
Atxn1P54254 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Atxn1P54254 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atxn1P54254 Gm5874-201ENSMUST00000096101 508 ntBASIC20.78■□□□□ 0.92
Atxn1P54254 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Atxn1P54254 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.77■□□□□ 0.92
Atxn1P54254 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Atxn1P54254 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atxn1P54254 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.77■□□□□ 0.92
Atxn1P54254 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Atxn1P54254 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Atxn1P54254 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atxn1P54254 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Atxn1P54254 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms