Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hcn3O88705 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hcn3O88705 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Hcn3O88705 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hcn3O88705 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Hcn3O88705 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hcn3O88705 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Hcn3O88705 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Hcn3O88705 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcn3O88705 Scarna2-201ENSMUST00000157560 414 ntBASIC20.07■□□□□ 0.8
Hcn3O88705 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hcn3O88705 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hcn3O88705 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcn3O88705 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn3O88705 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn3O88705 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Hcn3O88705 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn3O88705 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn3O88705 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Hcn3O88705 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcn3O88705 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.05■□□□□ 0.8
Hcn3O88705 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Hcn3O88705 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn3O88705 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn3O88705 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn3O88705 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.05■□□□□ 0.8
Hcn3O88705 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn3O88705 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn3O88705 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcn3O88705 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Hcn3O88705 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hcn3O88705 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hcn3O88705 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hcn3O88705 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hcn3O88705 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Hcn3O88705 Gm9806-201ENSMUST00000051080 552 ntBASIC20.04■□□□□ 0.8
Hcn3O88705 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hcn3O88705 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Hcn3O88705 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hcn3O88705 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn3O88705 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hcn3O88705 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.03■□□□□ 0.8
Hcn3O88705 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn3O88705 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn3O88705 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn3O88705 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn3O88705 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.03■□□□□ 0.8
Hcn3O88705 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn3O88705 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcn3O88705 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hcn3O88705 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.03■□□□□ 0.8
Hcn3O88705 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Hcn3O88705 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn3O88705 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn3O88705 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn3O88705 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hcn3O88705 Gm16437-201ENSMUST00000025669 507 ntBASIC20.02■□□□□ 0.8
Hcn3O88705 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hcn3O88705 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hcn3O88705 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn3O88705 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn3O88705 Gm11175-201ENSMUST00000116172 543 ntBASIC20.01■□□□□ 0.79
Hcn3O88705 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Hcn3O88705 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Hcn3O88705 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn3O88705 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn3O88705 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hcn3O88705 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20■□□□□ 0.79
Hcn3O88705 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Hcn3O88705 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hcn3O88705 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hcn3O88705 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn3O88705 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn3O88705 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hcn3O88705 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn3O88705 Gm11687-201ENSMUST00000118911 886 ntBASIC19.99■□□□□ 0.79
Hcn3O88705 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn3O88705 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hcn3O88705 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcn3O88705 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn3O88705 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn3O88705 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.98■□□□□ 0.79
Hcn3O88705 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn3O88705 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn3O88705 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Hcn3O88705 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn3O88705 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.98■□□□□ 0.79
Hcn3O88705 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hcn3O88705 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn3O88705 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcn3O88705 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hcn3O88705 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hcn3O88705 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hcn3O88705 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hcn3O88705 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hcn3O88705 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Hcn3O88705 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.96■□□□□ 0.79
Hcn3O88705 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hcn3O88705 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hcn3O88705 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms