Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gfra3O35118 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Gfra3O35118 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Gfra3O35118 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Gfra3O35118 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gfra3O35118 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gfra3O35118 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gfra3O35118 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Gfra3O35118 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.15■□□□□ 0.5
Gfra3O35118 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gfra3O35118 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gfra3O35118 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.15■□□□□ 0.5
Gfra3O35118 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.15■□□□□ 0.5
Gfra3O35118 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.15■□□□□ 0.5
Gfra3O35118 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Gfra3O35118 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Gfra3O35118 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Gfra3O35118 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Gfra3O35118 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gfra3O35118 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gfra3O35118 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gfra3O35118 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.14■□□□□ 0.49
Gfra3O35118 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gfra3O35118 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Gfra3O35118 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Gfra3O35118 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gfra3O35118 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Gfra3O35118 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gfra3O35118 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gfra3O35118 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gfra3O35118 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gfra3O35118 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Gfra3O35118 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gfra3O35118 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Gfra3O35118 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gfra3O35118 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gfra3O35118 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gfra3O35118 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.12■□□□□ 0.49
Gfra3O35118 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gfra3O35118 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gfra3O35118 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gfra3O35118 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gfra3O35118 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Gfra3O35118 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.11■□□□□ 0.49
Gfra3O35118 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
Gfra3O35118 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gfra3O35118 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gfra3O35118 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Gfra3O35118 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gfra3O35118 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gfra3O35118 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gfra3O35118 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Gfra3O35118 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gfra3O35118 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gfra3O35118 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Gfra3O35118 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gfra3O35118 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gfra3O35118 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gfra3O35118 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.1■□□□□ 0.49
Gfra3O35118 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.1■□□□□ 0.49
Gfra3O35118 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Gfra3O35118 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gfra3O35118 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gfra3O35118 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gfra3O35118 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.1■□□□□ 0.49
Gfra3O35118 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Gfra3O35118 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gfra3O35118 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gfra3O35118 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gfra3O35118 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gfra3O35118 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gfra3O35118 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gfra3O35118 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.09■□□□□ 0.49
Gfra3O35118 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gfra3O35118 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.09■□□□□ 0.49
Gfra3O35118 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gfra3O35118 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gfra3O35118 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.09■□□□□ 0.49
Gfra3O35118 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gfra3O35118 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.09■□□□□ 0.49
Gfra3O35118 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gfra3O35118 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gfra3O35118 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gfra3O35118 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Gfra3O35118 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Gfra3O35118 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gfra3O35118 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.08■□□□□ 0.48
Gfra3O35118 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gfra3O35118 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gfra3O35118 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gfra3O35118 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gfra3O35118 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gfra3O35118 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.07■□□□□ 0.48
Gfra3O35118 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.07■□□□□ 0.48
Gfra3O35118 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.07■□□□□ 0.48
Gfra3O35118 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gfra3O35118 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Gfra3O35118 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gfra3O35118 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gfra3O35118 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms