Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Igkv1-88A0A140T8N1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Igkv1-88A0A140T8N1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Igkv1-88A0A140T8N1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Igkv1-88A0A140T8N1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Igkv1-88A0A140T8N1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Igkv1-88A0A140T8N1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Igkv1-88A0A140T8N1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Gm6311-201ENSMUST00000073790 878 ntBASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv1-88A0A140T8N1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv1-88A0A140T8N1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC13.78□□□□□ -0.2
Igkv1-88A0A140T8N1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Igkv1-88A0A140T8N1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC13.77□□□□□ -0.21
Igkv1-88A0A140T8N1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv1-88A0A140T8N1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv1-88A0A140T8N1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv1-88A0A140T8N1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv1-88A0A140T8N1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv1-88A0A140T8N1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC13.76□□□□□ -0.21
Igkv1-88A0A140T8N1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv1-88A0A140T8N1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms