Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gm7199-201ENSMUST00000118327 1485 ntBASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Gm4799-201ENSMUST00000095396 657 ntBASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9d-4A0A0G2JG37 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Trav9d-4A0A0G2JG37 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9d-4A0A0G2JG37 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.33□□□□□ -0.11
Trav9d-4A0A0G2JG37 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9d-4A0A0G2JG37 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav9d-4A0A0G2JG37 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-4A0A0G2JG37 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav9d-4A0A0G2JG37 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav9d-4A0A0G2JG37 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-4A0A0G2JG37 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-4A0A0G2JG37 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-4A0A0G2JG37 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav9d-4A0A0G2JG37 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav9d-4A0A0G2JG37 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-4A0A0G2JG37 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Trav9d-4A0A0G2JG37 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-4A0A0G2JG37 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-4A0A0G2JG37 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-4A0A0G2JG37 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-4A0A0G2JG37 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.27□□□□□ -0.13
Trav9d-4A0A0G2JG37 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-4A0A0G2JG37 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Trav9d-4A0A0G2JG37 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Trav9d-4A0A0G2JG37 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-4A0A0G2JG37 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-4A0A0G2JG37 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-4A0A0G2JG37 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav9d-4A0A0G2JG37 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-4A0A0G2JG37 Gm9812-201ENSMUST00000061934 968 ntBASIC14.26□□□□□ -0.13
Trav9d-4A0A0G2JG37 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms