Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav4-3A0A0B4J1K1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-3A0A0B4J1K1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav4-3A0A0B4J1K1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-3A0A0B4J1K1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-3A0A0B4J1K1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-3A0A0B4J1K1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-3A0A0B4J1K1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav4-3A0A0B4J1K1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav4-3A0A0B4J1K1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-3A0A0B4J1K1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-3A0A0B4J1K1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav4-3A0A0B4J1K1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Trav4-3A0A0B4J1K1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-3A0A0B4J1K1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.33□□□□□ -0.12
Trav4-3A0A0B4J1K1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.33□□□□□ -0.12
Trav4-3A0A0B4J1K1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav4-3A0A0B4J1K1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav4-3A0A0B4J1K1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-3A0A0B4J1K1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
Trav4-3A0A0B4J1K1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav4-3A0A0B4J1K1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-3A0A0B4J1K1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav4-3A0A0B4J1K1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav4-3A0A0B4J1K1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-3A0A0B4J1K1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-3A0A0B4J1K1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-3A0A0B4J1K1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-3A0A0B4J1K1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-3A0A0B4J1K1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-3A0A0B4J1K1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-3A0A0B4J1K1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-3A0A0B4J1K1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-3A0A0B4J1K1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-3A0A0B4J1K1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Tdp2-203ENSMUST00000223804 1136 ntBASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav4-3A0A0B4J1K1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav4-3A0A0B4J1K1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-3A0A0B4J1K1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav4-3A0A0B4J1K1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-3A0A0B4J1K1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-3A0A0B4J1K1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-3A0A0B4J1K1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav4-3A0A0B4J1K1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-3A0A0B4J1K1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-3A0A0B4J1K1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-3A0A0B4J1K1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav4-3A0A0B4J1K1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.26□□□□□ -0.13
Trav4-3A0A0B4J1K1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav4-3A0A0B4J1K1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav4-3A0A0B4J1K1 Gm13889-201ENSMUST00000099689 1386 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms