Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm7432-201ENSMUST00000210343 879 ntBASIC14.39□□□□□ -0.11
Trav11A0A0B4J1J9 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.39□□□□□ -0.11
Trav11A0A0B4J1J9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav11A0A0B4J1J9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav11A0A0B4J1J9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav11A0A0B4J1J9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav11A0A0B4J1J9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav11A0A0B4J1J9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav11A0A0B4J1J9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav11A0A0B4J1J9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav11A0A0B4J1J9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav11A0A0B4J1J9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav11A0A0B4J1J9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav11A0A0B4J1J9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav11A0A0B4J1J9 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.37□□□□□ -0.11
Trav11A0A0B4J1J9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav11A0A0B4J1J9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav11A0A0B4J1J9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav11A0A0B4J1J9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav11A0A0B4J1J9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav11A0A0B4J1J9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav11A0A0B4J1J9 Gm11599-201ENSMUST00000118720 878 ntBASIC14.36□□□□□ -0.11
Trav11A0A0B4J1J9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav11A0A0B4J1J9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav11A0A0B4J1J9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Trav11A0A0B4J1J9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav11A0A0B4J1J9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Trav11A0A0B4J1J9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav11A0A0B4J1J9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav11A0A0B4J1J9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav11A0A0B4J1J9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav11A0A0B4J1J9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav11A0A0B4J1J9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav11A0A0B4J1J9 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav11A0A0B4J1J9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav11A0A0B4J1J9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav11A0A0B4J1J9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav11A0A0B4J1J9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav11A0A0B4J1J9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav11A0A0B4J1J9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav11A0A0B4J1J9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav11A0A0B4J1J9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Trav11A0A0B4J1J9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav11A0A0B4J1J9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav11A0A0B4J1J9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav11A0A0B4J1J9 Gm44428-201ENSMUST00000204474 874 ntBASIC14.31□□□□□ -0.12
Trav11A0A0B4J1J9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav11A0A0B4J1J9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav11A0A0B4J1J9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms