Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8-1A0A075B641 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8-1A0A075B641 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav8-1A0A075B641 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8-1A0A075B641 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8-1A0A075B641 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8-1A0A075B641 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8-1A0A075B641 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8-1A0A075B641 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav8-1A0A075B641 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav8-1A0A075B641 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav8-1A0A075B641 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8-1A0A075B641 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8-1A0A075B641 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8-1A0A075B641 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav8-1A0A075B641 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav8-1A0A075B641 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav8-1A0A075B641 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav8-1A0A075B641 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Trav8-1A0A075B641 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8-1A0A075B641 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8-1A0A075B641 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8-1A0A075B641 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8-1A0A075B641 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trav8-1A0A075B641 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trav8-1A0A075B641 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav8-1A0A075B641 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav8-1A0A075B641 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8-1A0A075B641 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8-1A0A075B641 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8-1A0A075B641 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8-1A0A075B641 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.95□□□□□ -0.02
Trav8-1A0A075B641 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8-1A0A075B641 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav8-1A0A075B641 Golph3-202ENSMUST00000226517 2359 ntBASIC14.95□□□□□ -0.02
Trav8-1A0A075B641 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.94□□□□□ -0.02
Trav8-1A0A075B641 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav8-1A0A075B641 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8-1A0A075B641 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav8-1A0A075B641 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav8-1A0A075B641 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8-1A0A075B641 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8-1A0A075B641 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8-1A0A075B641 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8-1A0A075B641 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8-1A0A075B641 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav8-1A0A075B641 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8-1A0A075B641 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8-1A0A075B641 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav8-1A0A075B641 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms