Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trav6-7-dv9A0A075B639 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6-7-dv9A0A075B639 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trav6-7-dv9A0A075B639 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.68■□□□□ 0.58
Trav6-7-dv9A0A075B639 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trav6-7-dv9A0A075B639 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-7-dv9A0A075B639 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-7-dv9A0A075B639 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trav6-7-dv9A0A075B639 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Trav6-7-dv9A0A075B639 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-7-dv9A0A075B639 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.67■□□□□ 0.58
Trav6-7-dv9A0A075B639 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-7-dv9A0A075B639 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav6-7-dv9A0A075B639 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.67■□□□□ 0.58
Trav6-7-dv9A0A075B639 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6-7-dv9A0A075B639 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.65■□□□□ 0.58
Trav6-7-dv9A0A075B639 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-7-dv9A0A075B639 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-7-dv9A0A075B639 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.65■□□□□ 0.58
Trav6-7-dv9A0A075B639 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.65■□□□□ 0.58
Trav6-7-dv9A0A075B639 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-7-dv9A0A075B639 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-7-dv9A0A075B639 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6-7-dv9A0A075B639 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6-7-dv9A0A075B639 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6-7-dv9A0A075B639 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-7-dv9A0A075B639 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trav6-7-dv9A0A075B639 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-7-dv9A0A075B639 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-7-dv9A0A075B639 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.63■□□□□ 0.57
Trav6-7-dv9A0A075B639 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6-7-dv9A0A075B639 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-7-dv9A0A075B639 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-7-dv9A0A075B639 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trav6-7-dv9A0A075B639 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-7-dv9A0A075B639 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-7-dv9A0A075B639 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-7-dv9A0A075B639 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trav6-7-dv9A0A075B639 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6-7-dv9A0A075B639 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6-7-dv9A0A075B639 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6-7-dv9A0A075B639 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.61■□□□□ 0.57
Trav6-7-dv9A0A075B639 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav6-7-dv9A0A075B639 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6-7-dv9A0A075B639 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6-7-dv9A0A075B639 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6-7-dv9A0A075B639 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6-7-dv9A0A075B639 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav6-7-dv9A0A075B639 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trav6-7-dv9A0A075B639 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-7-dv9A0A075B639 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Trav6-7-dv9A0A075B639 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-7-dv9A0A075B639 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-7-dv9A0A075B639 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-7-dv9A0A075B639 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-7-dv9A0A075B639 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-7-dv9A0A075B639 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6-7-dv9A0A075B639 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trav6-7-dv9A0A075B639 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.59■□□□□ 0.57
Trav6-7-dv9A0A075B639 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-7-dv9A0A075B639 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav6-7-dv9A0A075B639 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.59■□□□□ 0.57
Trav6-7-dv9A0A075B639 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Trav6-7-dv9A0A075B639 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav6-7-dv9A0A075B639 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-7-dv9A0A075B639 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6-7-dv9A0A075B639 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6-7-dv9A0A075B639 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6-7-dv9A0A075B639 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav6-7-dv9A0A075B639 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6-7-dv9A0A075B639 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.58■□□□□ 0.56
Trav6-7-dv9A0A075B639 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trav6-7-dv9A0A075B639 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6-7-dv9A0A075B639 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.58■□□□□ 0.56
Trav6-7-dv9A0A075B639 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Trav6-7-dv9A0A075B639 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6-7-dv9A0A075B639 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6-7-dv9A0A075B639 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Trav6-7-dv9A0A075B639 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trav6-7-dv9A0A075B639 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trav6-7-dv9A0A075B639 Cap2-205ENSMUST00000225824 1634 ntBASIC18.57■□□□□ 0.56
Trav6-7-dv9A0A075B639 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-7-dv9A0A075B639 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav6-7-dv9A0A075B639 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.57■□□□□ 0.56
Trav6-7-dv9A0A075B639 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-7-dv9A0A075B639 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6-7-dv9A0A075B639 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trav6-7-dv9A0A075B639 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6-7-dv9A0A075B639 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav6-7-dv9A0A075B639 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms