Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trav4-2A0A075B638 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4-2A0A075B638 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4-2A0A075B638 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Trav4-2A0A075B638 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4-2A0A075B638 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4-2A0A075B638 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4-2A0A075B638 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav4-2A0A075B638 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav4-2A0A075B638 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.67■□□□□ 0.26
Trav4-2A0A075B638 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4-2A0A075B638 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav4-2A0A075B638 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4-2A0A075B638 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4-2A0A075B638 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav4-2A0A075B638 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav4-2A0A075B638 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-2A0A075B638 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-2A0A075B638 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-2A0A075B638 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-2A0A075B638 Gm45364-201ENSMUST00000210883 159 ntBASIC16.66■□□□□ 0.26
Trav4-2A0A075B638 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-2A0A075B638 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-2A0A075B638 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav4-2A0A075B638 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav4-2A0A075B638 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-2A0A075B638 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-2A0A075B638 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-2A0A075B638 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-2A0A075B638 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-2A0A075B638 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-2A0A075B638 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav4-2A0A075B638 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-2A0A075B638 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav4-2A0A075B638 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav4-2A0A075B638 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav4-2A0A075B638 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav4-2A0A075B638 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4-2A0A075B638 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4-2A0A075B638 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Trav4-2A0A075B638 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4-2A0A075B638 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4-2A0A075B638 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trav4-2A0A075B638 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav4-2A0A075B638 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4-2A0A075B638 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4-2A0A075B638 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4-2A0A075B638 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trav4-2A0A075B638 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trav4-2A0A075B638 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4-2A0A075B638 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4-2A0A075B638 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4-2A0A075B638 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav4-2A0A075B638 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4-2A0A075B638 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav4-2A0A075B638 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 145.8 ms