Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Upk1bQ9Z2C6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Gm15371-201ENSMUST00000117057 784 ntBASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk1bQ9Z2C6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Map1b-203ENSMUST00000223725 2669 ntBASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Gm13689-201ENSMUST00000119360 685 ntBASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Gm44069-201ENSMUST00000204898 506 ntBASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk1bQ9Z2C6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Gm26308-201ENSMUST00000157768 69 ntBASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Gm28760-201ENSMUST00000185995 736 ntBASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Gm29667-201ENSMUST00000190817 490 ntBASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Upk1bQ9Z2C6 Gm8227-201ENSMUST00000223306 571 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms