Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Gm11637-201ENSMUST00000120601 592 ntBASIC11.17□□□□□ -0.62
Scrt1Q99M85 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Gm27023-201ENSMUST00000182372 285 ntBASIC11.17□□□□□ -0.62
Scrt1Q99M85 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Gm8959-201ENSMUST00000213150 571 ntBASIC11.17□□□□□ -0.62
Scrt1Q99M85 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.17□□□□□ -0.62
Scrt1Q99M85 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Gm11531-201ENSMUST00000117614 555 ntBASIC11.16□□□□□ -0.62
Scrt1Q99M85 Gm7857-201ENSMUST00000117957 358 ntBASIC11.16□□□□□ -0.62
Scrt1Q99M85 Gm17208-201ENSMUST00000168388 535 ntBASIC11.16□□□□□ -0.62
Scrt1Q99M85 Gm20426-201ENSMUST00000173657 440 ntBASIC11.16□□□□□ -0.62
Scrt1Q99M85 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.16□□□□□ -0.62
Scrt1Q99M85 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Scrt1Q99M85 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Scrt1Q99M85 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Scrt1Q99M85 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms