Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 FBXO36P1-201ENST00000579006 471 ntBASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 AC079331.1-201ENST00000623200 1200 ntBASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COL25A1Q9BXS0 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 CFL1P6-201ENST00000400899 494 ntBASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 FAM58BP-201ENST00000439056 645 ntBASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 TREHP1-201ENST00000531328 465 ntBASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 AC124068.2-201ENST00000569473 1109 ntBASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 MIR4683-201ENST00000579659 81 ntBASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 MIR6746-201ENST00000620971 63 ntBASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 AL355312.1-201ENST00000407115 2176 ntBASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 MBLAC2-202ENST00000514906 1936 ntBASIC15.53■□□□□ 0.08
COL25A1Q9BXS0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 AC015909.3-201ENST00000572855 1794 ntBASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 GGTLC4P-201ENST00000402176 664 ntBASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 AL121949.3-201ENST00000406684 385 ntBASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 AHCYP3-201ENST00000420053 1279 ntBASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 RPL35P9-201ENST00000446059 350 ntBASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 FTH1P22-201ENST00000456305 520 ntBASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 RN7SL363P-201ENST00000482412 273 ntBASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 AL358472.3-201ENST00000608147 415 ntBASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 AC009560.1-201ENST00000620208 434 ntBASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 MIEF1-215ENST00000637854 213 ntBASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COL25A1Q9BXS0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
COL25A1Q9BXS0 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.51■□□□□ 0.07
COL25A1Q9BXS0 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL25A1Q9BXS0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.51■□□□□ 0.07
COL25A1Q9BXS0 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms