Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.19□□□□□ -0.62
Scrt1Q99M85 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Gm26956-201ENSMUST00000182176 986 ntBASIC11.19□□□□□ -0.62
Scrt1Q99M85 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 AU022133-201ENSMUST00000200601 873 ntBASIC11.19□□□□□ -0.62
Scrt1Q99M85 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.19□□□□□ -0.62
Scrt1Q99M85 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.19□□□□□ -0.62
Scrt1Q99M85 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Scrt1Q99M85 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Scrt1Q99M85 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Gm10434-201ENSMUST00000101158 471 ntBASIC11.18□□□□□ -0.62
Scrt1Q99M85 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Scrt1Q99M85 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Gm38317-201ENSMUST00000195564 343 ntBASIC11.18□□□□□ -0.62
Scrt1Q99M85 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Scrt1Q99M85 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.17□□□□□ -0.62
Scrt1Q99M85 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.17□□□□□ -0.62
Scrt1Q99M85 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms